Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.260084	Eif4a2	eukaryotic translation initiation factor 4A2	16	16 14.2 cM	13682
Gene Ontology	ATP binding | ATP dependent helicase activity | DNA binding | helicase activity | hydrolase activity | nucleic acid binding | protein biosynthesis | RNA binding | translation initiation factor activity
Human Homolog	EIF4A2[eukaryotic translation initiation factor 4A, isoform 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 172 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TCTTAATGAA (2) 27.7 0.0277 P8 Cb GC TATTAATAAA (8) 6.5 0.0065 P8 Cb GC AATGTGGCTG (4) 3.3 0.0033 P8 Cb GC ATGCAATTAT (3) 3.3 0.0033 P8 Cb GC CCAGGGGAAT (5) 3.3 0.0033 P8 Cb GC CTTGGATGGG (4) 3.3 0.0033 P8 Cb GC AGGGAAATCG (2) 1.6 0.0016 P8 Cb GC CCGTGTTCTG (4) 1.6 0.0016 P8 Cb GC GACCAGAAGG (6) 1.6 0.0016 P8 Cb GC GGGGGCCAGA 1.6 0.0016 Cb medulloblastoma TCTTAATGAA (2) 46.2 0.0462 Cb medulloblastoma TATTAATAAA (8) 32.4 0.0324 Cb medulloblastoma GGGGGCCAGA 11.6 0.0116 Cb medulloblastoma TGCAATATGG 9.2 0.0092 Cb medulloblastoma AATGTGGCTG (4) 4.6 0.0046 Cb medulloblastoma CCAGGGGAAT (5) 4.6 0.0046 Cb medulloblastoma ATGCAATTAT (3) 2.3 0.0023 Cb medulloblastoma GAAACCAATT (2) 2.3 0.0023 Cb medulloblastoma GCTGGATGGG 2.3 0.0023 Cb medulloblastoma TTGAATAAAA (4) 2.3 0.0023 Cb medulloblastoma TTTTAATGAA (4) 2.3 0.0023 P8 GC+1d culture TCTTAATGAA (2) 21.7 0.0217 P8 GC+1d culture TGCAATATGG 5.7 0.0057 P8 GC+1d culture CAAATTTTCT (4) 3.4 0.0034 P8 GC+1d culture CCAGGGGAAT (5) 3.4 0.0034 P8 GC+1d culture GAAACCAATT (2) 2.3 0.0023 P8 GC+1d culture AATGTGGCTG (4) 1.1 0.0011 P8 GC+1d culture AGGGAAATCG (2) 1.1 0.0011 P8 GC+1d culture CCGTGTTCTG (4) 1.1 0.0011 P8 GC+1d culture CTTGGATGGG (4) 1.1 0.0011 P8 GC+1d culture GACCAGAAGG (6) 1.1 0.0011 P8 GC+1d culture GGGGGCCAGA 1.1 0.0011 P8 GC+1d culture TATTAATAAA (8) 1.1 0.0011 P8 GC+1d culture TTGAATAAAA (4) 1.1 0.0011 P8 GC+SHH+1d culture TCTTAATGAA (2) 21.1 0.0211 P8 GC+SHH+1d culture GAAACCAATT (2) 3.5 0.0035 P8 GC+SHH+1d culture TGCAATATGG 3.5 0.0035 P8 GC+SHH+1d culture AATGTGGCTG (4) 2.3 0.0023 P8 GC+SHH+1d culture GGGGGCCAGA 2.3 0.0023 P8 GC+SHH+1d culture TATTAATAAA (8) 2.3 0.0023 P8 GC+SHH+1d culture TGCTTTTTTT (7) 2.3 0.0023 P8 GC+SHH+1d culture ATGCAATTAT (3) 1.2 0.0012 P8 GC+SHH+1d culture CCAGGGGAAT (5) 1.2 0.0012 P8 GC+SHH+1d culture CTTGGATGGG (4) 1.2 0.0012 3T3 fibroblasts GGGGGCCAGA 10.5 0.0105 3T3 fibroblasts AATGTGGCTG (4) 7 0.007 3T3 fibroblasts CAGAGATCCA 3.5 0.0035 E15 cortex AGGGAAATCG (2) 9.9 0.0099 E15 cortex GGGGGCCAGA 9.9 0.0099 E15 cortex AATGTGGCTG (4) 4.9 0.0049 E15 cortex CAGAGATCCA 4.9 0.0049 E15 cortex GCTGGATGGG 4.9 0.0049 E15 cortex GGCATTTCCT (3) 4.9 0.0049 E15 cortex TCTTAATGAA (2) 4.9 0.0049 E15 cortex TGCTTTTTTT (7) 4.9 0.0049 P1 cortex TCTTAATGAA (2) 18.2 0.0182 P1 cortex TATTAATAAA (8) 13.6 0.0136 P1 cortex AATGTGGCTG (4) 4.5 0.0045 P1 cortex AATTTCTTGG (2) 4.5 0.0045 P1 cortex CTTGGATGGG (4) 4.5 0.0045 P1 cortex GAAACCAATT (2) 4.5 0.0045 Hypothalamus TCTTAATGAA (2) 99.6 0.0996 Hypothalamus TATTAATAAA (8) 45.3 0.0453 Hypothalamus TGCAATATGG 36.2 0.0362 Hypothalamus AATGTGGCTG (4) 12.7 0.0127 Hypothalamus GGGGGCCAGA 5.4 0.0054 Hypothalamus GAAACCAATT (2) 3.6 0.0036 Hypothalamus GGCATTTCCT (3) 3.6 0.0036 Hypothalamus CTTGGATGGG (4) 1.8 0.0018 Hypothalamus TTGAATAAAA (4) 1.8 0.0018 Hypothalamus TTTTAATGAA (4) 1.8 0.0018 E12.5 retina TCTTAATGAA (2) 50.7 0.0507 E12.5 retina AATGTGGCTG (4) 5.6 0.0056 E12.5 retina TGCAATATGG 5.6 0.0056 E12.5 retina CCAGGGGAAT (5) 3.8 0.0038 E12.5 retina AATTTCTTGG (2) 1.9 0.0019 E12.5 retina GGGGGCCAGA 1.9 0.0019 E12.5 retina TATTAATAAA (8) 1.9 0.0019 E12.5 retina TTTTAATGAA (4) 1.9 0.0019 E14.5 retina TCTTAATGAA (2) 20 0.02 E14.5 retina GGGGGCCAGA 10.9 0.0109 E14.5 retina TGCAATATGG 7.3 0.0073 E14.5 retina TTGAATAAAA (4) 3.6 0.0036 E14.5 retina ATGCAATTAT (3) 1.8 0.0018 E14.5 retina GACCAGAAGG (6) 1.8 0.0018 E14.5 retina TATTAATAAA (8) 1.8 0.0018 E14.5 retina TCCTACATCT (2) 1.8 0.0018 E14.5 retina TGCTTTTTTT (7) 1.8 0.0018 E16.5 retina TCTTAATGAA (2) 21.7 0.0217 E16.5 retina TATTAATAAA (8) 16.3 0.0163 E16.5 retina ATGCAATTAT (3) 7.2 0.0072 E16.5 retina TGCAATATGG 7.2 0.0072 E16.5 retina AATGTGGCTG (4) 5.4 0.0054 E16.5 retina GGGGGCCAGA 3.6 0.0036 E16.5 retina AGGGAAATCG (2) 1.8 0.0018 E16.5 retina GACCAGAAGG (6) 1.8 0.0018 E18.5 retina TCTTAATGAA (2) 38.2 0.0382 E18.5 retina GGGGGCCAGA 10.9 0.0109 E18.5 retina TATTAATAAA (8) 7.3 0.0073 E18.5 retina TGCAATATGG 3.6 0.0036 E18.5 retina ATGCAATTAT (3) 1.8 0.0018 E18.5 retina CCAGGGGAAT (5) 1.8 0.0018 E18.5 retina GAAACCAATT (2) 1.8 0.0018 E18.5 retina TGCTTTTTTT (7) 1.8 0.0018 P0.5 retina TCTTAATGAA (2) 29.4 0.0294 P0.5 retina GGGGGCCAGA 13.7 0.0137 P0.5 retina TGCAATATGG 7.9 0.0079 P0.5 retina AATGTGGCTG (4) 3.9 0.0039 P0.5 retina CCAGGGGAAT (5) 2 0.002 P0.5 retina TATTAATAAA (8) 2 0.002 P0.5 retina TCCTACATCT (2) 2 0.002 P2.5 retina TCTTAATGAA (2) 35.2 0.0352 P2.5 retina GGGGGCCAGA 21.1 0.0211 P2.5 retina TATTAATAAA (8) 5.3 0.0053 P2.5 retina TCCTACATCT (2) 5.3 0.0053 P2.5 retina AATGTGGCTG (4) 3.5 0.0035 P2.5 retina CCGTGTTCTG (4) 3.5 0.0035 P2.5 retina TGCAATATGG 1.8 0.0018 P4.5 retina TCTTAATGAA (2) 33.7 0.0337 P4.5 retina GGGGGCCAGA 31.7 0.0317 P4.5 retina TATTAATAAA (8) 15.9 0.0159 P4.5 retina GAAACCAATT (2) 2 0.002 P4.5 retina TGCAATATGG 2 0.002 P4.5 retina TGCTTTTTTT (7) 2 0.002 P4.5 retina TTTTAATGAA (4) 2 0.002 P6.5 retina TCTTAATGAA (2) 41.7 0.0417 P6.5 retina TCCTACATCT (2) 21.7 0.0217 P6.5 retina GGGGGCCAGA 18.3 0.0183 P6.5 retina TATTAATAAA (8) 16.7 0.0167 P6.5 retina TGCAATATGG 11.7 0.0117 P6.5 retina GAAACCAATT (2) 6.7 0.0067 P6.5 retina CCAGGGGAAT (5) 3.3 0.0033 P6.5 retina GCTGGATGGG 1.7 0.0017 P6.5 retina TTTTAATGAA (4) 1.7 0.0017 P10.5 crx- retina TCTTAATGAA (2) 31.6 0.0316 P10.5 crx- retina GGGGGCCAGA 16.7 0.0167 P10.5 crx- retina TATTAATAAA (8) 9.3 0.0093 P10.5 crx- retina GAAACCAATT (2) 5.6 0.0056 P10.5 crx- retina TCCTACATCT (2) 5.6 0.0056 P10.5 crx- retina TGCAATATGG 3.7 0.0037 P10.5 crx- retina AATGTGGCTG (4) 1.9 0.0019 P10.5 crx- retina ATGCAATTAT (3) 1.9 0.0019 P10.5 crx- retina CCAGGGGAAT (5) 1.9 0.0019 P10.5 crx+ retina TCTTAATGAA (2) 28.8 0.0288 P10.5 crx+ retina GGGGGCCAGA 17.3 0.0173 P10.5 crx+ retina TGCAATATGG 17.3 0.0173 P10.5 crx+ retina TATTAATAAA (8) 9.6 0.0096 P10.5 crx+ retina TCCTACATCT (2) 3.8 0.0038 P10.5 crx+ retina AATTTCTTGG (2) 1.9 0.0019 P10.5 crx+ retina CCAGGGGAAT (5) 1.9 0.0019 P10.5 crx+ retina CCGTGTTCTG (4) 1.9 0.0019 P10.5 crx+ retina CTTGGATGGG (4) 1.9 0.0019 P10.5 crx+ retina GAAACCAATT (2) 1.9 0.0019 P10.5 crx+ retina GACCAGAAGG (6) 1.9 0.0019 Adult retinal TCTTAATGAA (2) 16.7 0.0167 Adult retinal GAAACCAATT (2) 7.4 0.0074 Adult retinal GCTGGATGGG 3.7 0.0037 Adult retinal GGGGGCCAGA 3.7 0.0037 Adult retinal TATTAATAAA (8) 3.7 0.0037 Adult retinal TCCTACATCT (2) 3.7 0.0037 Adult retinal TGCAATATGG 3.7 0.0037 Adult retinal AATGTGGCTG (4) 1.9 0.0019 Adult retinal CCGTGTTCTG (4) 1.9 0.0019 Adult retinal GAGAAGGAAA (8) 1.9 0.0019 ONL TCTTAATGAA (2) 32.6 0.0326 ONL TATTAATAAA (8) 15.3 0.0153 ONL GAGAAGGAAA (8) 5.7 0.0057 ONL TCCTACATCT (2) 5.7 0.0057 ONL CAGAGATCCA 3.8 0.0038 ONL TGCAATATGG 3.8 0.0038 ONL GAAACCAATT (2) 1.9 0.0019 ONL GGGGGCCAGA 1.9 0.0019