Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.260084	Eif4a2	eukaryotic translation initiation factor 4A2	16	16 14.2 cM	13682
Gene Ontology	ATP binding | ATP dependent helicase activity | DNA binding | helicase activity | hydrolase activity | nucleic acid binding | protein biosynthesis | RNA binding | translation initiation factor activity
Human Homolog	EIF4A2[eukaryotic translation initiation factor 4A, isoform 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 101 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TCTTAATGAA 27.7 0.0277 P8 Cb GC AATGTGGCTG (2) 3.3 0.0033 P8 Cb GC ATGCAATTAT 3.3 0.0033 P8 Cb GC GACCAGAAGG (3) 1.6 0.0016 P8 Cb GC GGGGGCCAGA 1.6 0.0016 Cb medulloblastoma TCTTAATGAA 46.2 0.0462 Cb medulloblastoma GGGGGCCAGA 11.6 0.0116 Cb medulloblastoma TGCAATATGG 9.2 0.0092 Cb medulloblastoma AATGTGGCTG (2) 4.6 0.0046 Cb medulloblastoma ATGCAATTAT 2.3 0.0023 Cb medulloblastoma TTTTAATGAA 2.3 0.0023 P8 GC+1d culture TCTTAATGAA 21.7 0.0217 P8 GC+1d culture TGCAATATGG 5.7 0.0057 P8 GC+1d culture AATGTGGCTG (2) 1.1 0.0011 P8 GC+1d culture GACCAGAAGG (3) 1.1 0.0011 P8 GC+1d culture GGGGGCCAGA 1.1 0.0011 P8 GC+SHH+1d culture TCTTAATGAA 21.1 0.0211 P8 GC+SHH+1d culture TGCAATATGG 3.5 0.0035 P8 GC+SHH+1d culture AATGTGGCTG (2) 2.3 0.0023 P8 GC+SHH+1d culture GGGGGCCAGA 2.3 0.0023 P8 GC+SHH+1d culture ATGCAATTAT 1.2 0.0012 3T3 fibroblasts GGGGGCCAGA 10.5 0.0105 3T3 fibroblasts AATGTGGCTG (2) 7 0.007 3T3 fibroblasts CAGAGATCCA 3.5 0.0035 E15 cortex GGGGGCCAGA 9.9 0.0099 E15 cortex AATGTGGCTG (2) 4.9 0.0049 E15 cortex CAGAGATCCA 4.9 0.0049 E15 cortex GGCATTTCCT 4.9 0.0049 E15 cortex TCTTAATGAA 4.9 0.0049 P1 cortex TCTTAATGAA 18.2 0.0182 P1 cortex AATGTGGCTG (2) 4.5 0.0045 P1 cortex AATTTCTTGG 4.5 0.0045 Hypothalamus TCTTAATGAA 99.6 0.0996 Hypothalamus TGCAATATGG 36.2 0.0362 Hypothalamus AATGTGGCTG (2) 12.7 0.0127 Hypothalamus GGGGGCCAGA 5.4 0.0054 Hypothalamus GGCATTTCCT 3.6 0.0036 Hypothalamus TTTTAATGAA 1.8 0.0018 E12.5 retina TCTTAATGAA 50.7 0.0507 E12.5 retina AATGTGGCTG (2) 5.6 0.0056 E12.5 retina TGCAATATGG 5.6 0.0056 E12.5 retina AATTTCTTGG 1.9 0.0019 E12.5 retina GGGGGCCAGA 1.9 0.0019 E12.5 retina TTTTAATGAA 1.9 0.0019 E14.5 retina TCTTAATGAA 20 0.02 E14.5 retina GGGGGCCAGA 10.9 0.0109 E14.5 retina TGCAATATGG 7.3 0.0073 E14.5 retina ATGCAATTAT 1.8 0.0018 E14.5 retina GACCAGAAGG (3) 1.8 0.0018 E14.5 retina TCCTACATCT 1.8 0.0018 E16.5 retina TCTTAATGAA 21.7 0.0217 E16.5 retina ATGCAATTAT 7.2 0.0072 E16.5 retina TGCAATATGG 7.2 0.0072 E16.5 retina AATGTGGCTG (2) 5.4 0.0054 E16.5 retina GGGGGCCAGA 3.6 0.0036 E16.5 retina GACCAGAAGG (3) 1.8 0.0018 E18.5 retina TCTTAATGAA 38.2 0.0382 E18.5 retina GGGGGCCAGA 10.9 0.0109 E18.5 retina TGCAATATGG 3.6 0.0036 E18.5 retina ATGCAATTAT 1.8 0.0018 P0.5 retina TCTTAATGAA 29.4 0.0294 P0.5 retina GGGGGCCAGA 13.7 0.0137 P0.5 retina TGCAATATGG 7.9 0.0079 P0.5 retina AATGTGGCTG (2) 3.9 0.0039 P0.5 retina TCCTACATCT 2 0.002 P2.5 retina TCTTAATGAA 35.2 0.0352 P2.5 retina GGGGGCCAGA 21.1 0.0211 P2.5 retina TCCTACATCT 5.3 0.0053 P2.5 retina AATGTGGCTG (2) 3.5 0.0035 P2.5 retina TGCAATATGG 1.8 0.0018 P4.5 retina TCTTAATGAA 33.7 0.0337 P4.5 retina GGGGGCCAGA 31.7 0.0317 P4.5 retina TGCAATATGG 2 0.002 P4.5 retina TTTTAATGAA 2 0.002 P6.5 retina TCTTAATGAA 41.7 0.0417 P6.5 retina TCCTACATCT 21.7 0.0217 P6.5 retina GGGGGCCAGA 18.3 0.0183 P6.5 retina TGCAATATGG 11.7 0.0117 P6.5 retina TTTTAATGAA 1.7 0.0017 P10.5 crx- retina TCTTAATGAA 31.6 0.0316 P10.5 crx- retina GGGGGCCAGA 16.7 0.0167 P10.5 crx- retina TCCTACATCT 5.6 0.0056 P10.5 crx- retina TGCAATATGG 3.7 0.0037 P10.5 crx- retina AATGTGGCTG (2) 1.9 0.0019 P10.5 crx- retina ATGCAATTAT 1.9 0.0019 P10.5 crx+ retina TCTTAATGAA 28.8 0.0288 P10.5 crx+ retina GGGGGCCAGA 17.3 0.0173 P10.5 crx+ retina TGCAATATGG 17.3 0.0173 P10.5 crx+ retina TCCTACATCT 3.8 0.0038 P10.5 crx+ retina AATTTCTTGG 1.9 0.0019 P10.5 crx+ retina GACCAGAAGG (3) 1.9 0.0019 Adult retinal TCTTAATGAA 16.7 0.0167 Adult retinal GGGGGCCAGA 3.7 0.0037 Adult retinal TCCTACATCT 3.7 0.0037 Adult retinal TGCAATATGG 3.7 0.0037 Adult retinal AATGTGGCTG (2) 1.9 0.0019 ONL TCTTAATGAA 32.6 0.0326 ONL TCCTACATCT 5.7 0.0057 ONL CAGAGATCCA 3.8 0.0038 ONL TGCAATATGG 3.8 0.0038 ONL GGGGGCCAGA 1.9 0.0019