Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.260539
D230035N22Rik
RIKEN cDNA D230035N22 gene
11
319864
Mm.260539
Psmd11
proteasome (prosome, macropain) 26S subunit, non-ATPase, 11
11
11 B5
69077
Mm.260539
1700089D09Rik
RIKEN cDNA 1700089D09 gene
11
73519
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 49 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TAATCCGTAC
(
3
)
9.8
0.0098
P8 Cb GC
TCCAGTCCCT
(
3
)
3.3
0.0033
P8 Cb GC
AGAACTGGCC
(
3
)
1.6
0.0016
P8 Cb GC
CAGGCAGAGC
(
3
)
1.6
0.0016
P8 Cb GC
CTCTGTTTTT
(
4
)
1.6
0.0016
Cb medulloblastoma
TAATCCGTAC
(
3
)
2.3
0.0023
P8 GC+1d culture
TAATCCGTAC
(
3
)
5.7
0.0057
P8 GC+1d culture
AGAACTGGCC
(
3
)
1.1
0.0011
P8 GC+1d culture
CTCTGTTTTT
(
4
)
1.1
0.0011
P8 GC+1d culture
TCCAGTCCCT
(
3
)
1.1
0.0011
P8 GC+1d culture
TCTACAGCAG
(
4
)
1.1
0.0011
P8 GC+SHH+1d culture
TAATCCGTAC
(
3
)
9.4
0.0094
P8 GC+SHH+1d culture
TCCAGTCCCT
(
3
)
5.9
0.0059
P8 GC+SHH+1d culture
TCTACAGCAG
(
4
)
2.3
0.0023
3T3 fibroblasts
TCCAGTCCCT
(
3
)
7
0.007
E15 cortex
TCCAGTCCCT
(
3
)
24.7
0.0247
E15 cortex
CTCTGTTTTT
(
4
)
4.9
0.0049
Hypothalamus
TCCAGTCCCT
(
3
)
3.6
0.0036
Hypothalamus
CTCTGTTTTT
(
4
)
1.8
0.0018
Hypothalamus
TAATCCGTAC
(
3
)
1.8
0.0018
E12.5 retina
TCCAGTCCCT
(
3
)
5.6
0.0056
E12.5 retina
TAATCCGTAC
(
3
)
3.8
0.0038
E12.5 retina
CTCTGTTTTT
(
4
)
1.9
0.0019
E14.5 retina
TAATCCGTAC
(
3
)
12.8
0.0128
E14.5 retina
AAACTTCTTG
(
3
)
1.8
0.0018
E14.5 retina
AGAACTGGCC
(
3
)
1.8
0.0018
E16.5 retina
TAATCCGTAC
(
3
)
7.2
0.0072
E16.5 retina
AAACTTCTTG
(
3
)
1.8
0.0018
E16.5 retina
TCCAGTCCCT
(
3
)
1.8
0.0018
E18.5 retina
TAATCCGTAC
(
3
)
7.3
0.0073
E18.5 retina
TCCAGTCCCT
(
3
)
3.6
0.0036
P0.5 retina
TAATCCGTAC
(
3
)
3.9
0.0039
P0.5 retina
TCCAGTCCCT
(
3
)
3.9
0.0039
P2.5 retina
TAATCCGTAC
(
3
)
10.6
0.0106
P2.5 retina
CTCTGTTTTT
(
4
)
1.8
0.0018
P4.5 retina
TAATCCGTAC
(
3
)
7.9
0.0079
P4.5 retina
AGAACTGGCC
(
3
)
2
0.002
P4.5 retina
CTCTGTTTTT
(
4
)
2
0.002
P4.5 retina
TCCAGTCCCT
(
3
)
2
0.002
P6.5 retina
TAATCCGTAC
(
3
)
3.3
0.0033
P6.5 retina
TCCAGTCCCT
(
3
)
3.3
0.0033
P6.5 retina
CTCTGTTTTT
(
4
)
1.7
0.0017
P10.5 crx- retina
CTCTGTTTTT
(
4
)
3.7
0.0037
P10.5 crx- retina
TAATCCGTAC
(
3
)
3.7
0.0037
P10.5 crx- retina
TCCAGTCCCT
(
3
)
3.7
0.0037
P10.5 crx+ retina
TAATCCGTAC
(
3
)
7.7
0.0077
P10.5 crx+ retina
TCCAGTCCCT
(
3
)
3.8
0.0038
Adult retinal
AAACTTCTTG
(
3
)
1.9
0.0019
ONL
CAGGCAGAGC
(
3
)
5.7
0.0057
