Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.260539	D230035N22Rik	RIKEN cDNA D230035N22 gene	11		319864
Mm.260539	Psmd11	proteasome (prosome, macropain) 26S subunit, non-ATPase, 11	11	11 B5	69077
Mm.260539	1700089D09Rik	RIKEN cDNA 1700089D09 gene	11		73519
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 106 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAACCTTCTG (2) AGAACTGGCC (3) CAGGCAGAGC (3) CAGTCAGGCT CCCCACCCCA (2) CTCTGTTTTT (4) GGATTTGGAC (3) GTGGTGGCCC TAATCCGTAC (3) TCCAGTCCCT (3) 34.2 0.0342 Cb medulloblastoma CAGTCAGGCT CCCCACCCCA (2) GGATTTGGAC (3) GTGGTGGCCC TAATCCGTAC (3) 13.8 0.0138 P8 GC+1d culture AGAACTGGCC (3) CCCCACCCCA (2) CTCTGTTTTT (4) GTGGTGGCCC TAATCCGTAC (3) TCCAGTCCCT (3) TCTACAGCAG (4) 18.1 0.0181 P8 GC+SHH+1d culture AAACCTTCTG (2) CCCCACCCCA (2) GGATTTGGAC (3) TAATCCGTAC (3) TCCAGTCCCT (3) TCTACAGCAG (4) 31.6 0.0316 3T3 fibroblasts CCCCACCCCA (2) GTGGTGGCCC TCCAGTCCCT (3) 21 0.021 E15 cortex CCCCACCCCA (2) CTCTGTTTTT (4) TCCAGTCCCT (3) 34.5 0.0345 P1 cortex CAGTCAGGCT GTGGTGGCCC 9 0.009 Hypothalamus CCCCACCCCA (2) CTCTGTTTTT (4) GTGGTGGCCC TAATCCGTAC (3) TCCAGTCCCT (3) 10.8 0.0108 E12.5 retina CAGTCAGGCT CCCCACCCCA (2) CTCTGTTTTT (4) GGATTTGGAC (3) GTGGTGGCCC TAATCCGTAC (3) TCCAGTCCCT (3) 45.1 0.0451 E14.5 retina AAACTTCTTG (3) AGAACTGGCC (3) CCCCACCCCA (2) GGATTTGGAC (3) TAATCCGTAC (3) 29.1 0.0291 E16.5 retina AAACTTCTTG (3) CCCCACCCCA (2) GGATTTGGAC (3) GGGATTTTGG GTGGTGGCCC TAATCCGTAC (3) TCCAGTCCCT (3) 19.8 0.0198 E18.5 retina CCCCACCCCA (2) GAAAGAAATA GGATTTGGAC (3) TAATCCGTAC (3) TCCAGTCCCT (3) 25.4 0.0254 P0.5 retina CCCCACCCCA (2) GGATTTGGAC (3) GTGGTGGCCC TAATCCGTAC (3) TCCAGTCCCT (3) 19.6 0.0196 P2.5 retina CCCCACCCCA (2) CTCTGTTTTT (4) GAAAGAAATA GGATTTGGAC (3) GTGGTGGCCC TAATCCGTAC (3) 23 0.023 P4.5 retina AGAACTGGCC (3) CCCCACCCCA (2) CTCTGTTTTT (4) GAAAGAAATA GGGATTTTGG TAATCCGTAC (3) TCCAGTCCCT (3) 27.7 0.0277 P6.5 retina CTCTGTTTTT (4) GGGATTTTGG GTGGTGGCCC TAATCCGTAC (3) TCCAGTCCCT (3) 11.7 0.0117 P10.5 crx- retina CTCTGTTTTT (4) GAAAGAAATA GTGGTGGCCC TAATCCGTAC (3) TACTTCAGAG TCCAGTCCCT (3) 20.5 0.0205 P10.5 crx+ retina CAGTCAGGCT CCCCACCCCA (2) GAAAGAAATA GGATTTGGAC (3) GTGGTGGCCC TAATCCGTAC (3) TCCAGTCCCT (3) 26.7 0.0267 Adult retinal AAACTTCTTG (3) CCCCACCCCA (2) 7.5 0.0075 ONL CAGGCAGAGC (3) GAAAGAAATA GGATTTGGAC (3) 13.3 0.0133