Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.260545	Syncrip	synaptotagmin binding, cytoplasmic RNA interacting protein	9		56403
Mm.260545	D9Ertd306e	DNA segment, Chr 9, ERATO Doi 306, expressed	9	9 50.0 cM	52203
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 41 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCAAACAATC (2) 9.8 0.0098 P8 Cb GC GTATCTTAAT (2) 8.2 0.0082 P8 Cb GC TTTCTGGATA (2) 3.3 0.0033 P8 Cb GC CCTATTGGCA (2) 1.6 0.0016 Cb medulloblastoma CTTCACCGTG (3) 4.6 0.0046 Cb medulloblastoma GTATCTTAAT (2) 2.3 0.0023 P8 GC+1d culture GCAAACAATC (2) 4.6 0.0046 P8 GC+1d culture GTATCTTAAT (2) 3.4 0.0034 P8 GC+1d culture TTTCTGGATA (2) 2.3 0.0023 P8 GC+1d culture CTTCACCGTG (3) 1.1 0.0011 P8 GC+1d culture GCTCACACAG (2) 1.1 0.0011 P8 GC+SHH+1d culture GCAAACAATC (2) 7 0.007 P8 GC+SHH+1d culture CCTATTGGCA (2) 5.9 0.0059 P8 GC+SHH+1d culture GTATCTTAAT (2) 2.3 0.0023 P8 GC+SHH+1d culture CTTCACCGTG (3) 1.2 0.0012 3T3 fibroblasts GCTCACACAG (2) 10.5 0.0105 E15 cortex GCAAACAATC (2) 4.9 0.0049 P1 cortex GTATCTTAAT (2) 4.5 0.0045 Hypothalamus GCAAACAATC (2) 5.4 0.0054 Hypothalamus GCTCACACAG (2) 3.6 0.0036 E12.5 retina GCAAACAATC (2) 30 0.03 E12.5 retina CTTCACCGTG (3) 1.9 0.0019 E12.5 retina GTATCTTAAT (2) 1.9 0.0019 E12.5 retina TCTAATTTTC (2) 1.9 0.0019 E14.5 retina GCAAACAATC (2) 9.1 0.0091 E14.5 retina GTATCTTAAT (2) 5.5 0.0055 E14.5 retina TCTAATTTTC (2) 1.8 0.0018 E16.5 retina GCAAACAATC (2) 1.8 0.0018 E18.5 retina GCAAACAATC (2) 12.7 0.0127 P0.5 retina GTATCTTAAT (2) 2 0.002 P0.5 retina TCTAATTTTC (2) 2 0.002 P0.5 retina TTTCTGGATA (2) 2 0.002 P2.5 retina GCAAACAATC (2) 7 0.007 P2.5 retina TTTCTGGATA (2) 3.5 0.0035 P4.5 retina GCAAACAATC (2) 17.8 0.0178 P4.5 retina GCTCACACAG (2) 2 0.002 P6.5 retina GCAAACAATC (2) 6.7 0.0067 P10.5 crx- retina TTTCTGGATA (2) 1.9 0.0019 P10.5 crx+ retina GCAAACAATC (2) 3.8 0.0038 Adult retinal GCAAACAATC (2) 1.9 0.0019 ONL GCAAACAATC (2) 5.7 0.0057