Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.261025	Cdv3	carnitine deficiency-associated gene expressed in ventricle 3	9		321022
Mm.261025	2510010F10Rik	RIKEN cDNA 2510010F10 gene	9		77007
Mm.261025	C230084J24Rik	RIKEN cDNA C230084J24 gene	9		97532
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 90 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTTCTGACAG (3) 11.4 0.0114 P8 Cb GC GTGTCTGATA (4) 4.9 0.0049 P8 Cb GC AATTTTCAAA (4) 1.6 0.0016 P8 Cb GC TCTGTACTGT (4) 1.6 0.0016 P8 Cb GC TTAGTGGATT (5) 1.6 0.0016 Cb medulloblastoma GTTCTGACAG (3) 6.9 0.0069 Cb medulloblastoma CCTGAGAACC (6) 2.3 0.0023 Cb medulloblastoma GTTCTGACAA (8) 2.3 0.0023 Cb medulloblastoma TTTTAGTGGA (4) 2.3 0.0023 P8 GC+1d culture GTTCTGACAG (3) 16 0.016 P8 GC+1d culture GTGTCTGATA (4) 6.8 0.0068 P8 GC+1d culture TTAGTGGATT (5) 3.4 0.0034 P8 GC+1d culture GTTCTGACAA (8) 1.1 0.0011 P8 GC+1d culture TTTTAGTGGA (4) 1.1 0.0011 P8 GC+SHH+1d culture GTTCTGACAG (3) 19.9 0.0199 P8 GC+SHH+1d culture GTGTCTGATA (4) 2.3 0.0023 P8 GC+SHH+1d culture CCTGAGAACC (6) 1.2 0.0012 P8 GC+SHH+1d culture TTTCTGTTCA (3) 1.2 0.0012 P8 GC+SHH+1d culture TTTTCTGTTC (9) 1.2 0.0012 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts GTTCTGACAG (3) 10.5 0.0105 3T3 fibroblasts GTGTCTGATA (4) 3.5 0.0035 E15 cortex TCTGTACTGT (4) 9.9 0.0099 E15 cortex GTCATAGCTG (590) 4.9 0.0049 E15 cortex GTTCTGACAG (3) 4.9 0.0049 P1 cortex GTGTCTGATA (4) 22.7 0.0227 P1 cortex GTTCTGACAG (3) 13.6 0.0136 P1 cortex GTTCTGACAA (8) 4.5 0.0045 Hypothalamus GTTCTGACAG (3) 9.1 0.0091 Hypothalamus GCAAGGAACA (14) 1.8 0.0018 Hypothalamus GTGTCTGATA (4) 1.8 0.0018 E12.5 retina GTTCTGACAG (3) 30 0.03 E12.5 retina CTTGGCAGTG (3) 3.8 0.0038 E12.5 retina AATTTTCAAA (4) 1.9 0.0019 E12.5 retina CCTGAGAACC (6) 1.9 0.0019 E12.5 retina GTGTCTGATA (4) 1.9 0.0019 E12.5 retina GTTCTGACAA (8) 1.9 0.0019 E12.5 retina GTTTTGACAG (3) 1.9 0.0019 E12.5 retina TTTAGTGGAT (4) 1.9 0.0019 E14.5 retina GTTCTGACAG (3) 10.9 0.0109 E14.5 retina TTAGTGGATT (5) 1.8 0.0018 E16.5 retina GTTCTGACAG (3) 23.5 0.0235 E16.5 retina TTTATTGATT (4) 5.4 0.0054 E16.5 retina AATTTTCAAA (4) 1.8 0.0018 E16.5 retina GTGTCTGATA (4) 1.8 0.0018 E16.5 retina TTAGTGGATT (5) 1.8 0.0018 E18.5 retina GTTCTGACAG (3) 14.6 0.0146 E18.5 retina TTTTCTGTTC (9) 3.6 0.0036 E18.5 retina CCTGAGAACC (6) 1.8 0.0018 E18.5 retina GTGTCTGATA (4) 1.8 0.0018 P0.5 retina GTGTCTGATA (4) 7.9 0.0079 P0.5 retina GTTCTGACAG (3) 7.9 0.0079 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina GCAAGGAACA (14) 2 0.002 P0.5 retina GTTTTGACAG (3) 2 0.002 P2.5 retina GTTCTGACAG (3) 7 0.007 P2.5 retina AATTTTCAAA (4) 3.5 0.0035 P2.5 retina TTTAGTGGAT (4) 3.5 0.0035 P2.5 retina CTTGGCAGTG (3) 1.8 0.0018 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P2.5 retina TTTATTGATT (4) 1.8 0.0018 P2.5 retina TTTTCTGTTC (9) 1.8 0.0018 P4.5 retina GTTCTGACAG (3) 19.8 0.0198 P4.5 retina AATTTTCAAA (4) 2 0.002 P4.5 retina CCTGAGAACC (6) 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P4.5 retina GTGTCTGATA (4) 2 0.002 P4.5 retina TCTGTACTGT (4) 2 0.002 P6.5 retina GTTCTGACAG (3) 10 0.01 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina GTGTCTGATA (4) 1.7 0.0017 P10.5 crx- retina GTTCTGACAG (3) 7.4 0.0074 P10.5 crx- retina GCAAGGAACA (14) 3.7 0.0037 P10.5 crx- retina TTAGTGGATT (5) 3.7 0.0037 P10.5 crx- retina TTTCTGTTCA (3) 3.7 0.0037 P10.5 crx- retina AATTTTCAAA (4) 1.9 0.0019 P10.5 crx+ retina GTTCTGACAG (3) 7.7 0.0077 P10.5 crx+ retina CCTGAGAACC (6) 3.8 0.0038 P10.5 crx+ retina TTAGTGGATT (5) 1.9 0.0019 P10.5 crx+ retina TTTATTGATT (4) 1.9 0.0019 P10.5 crx+ retina TTTTCTGTTC (9) 1.9 0.0019 Adult retinal GTTCTGACAG (3) 3.7 0.0037 Adult retinal GCAAGGAACA (14) 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 Adult retinal TTAGTGGATT (5) 1.9 0.0019 Adult retinal TTTCTGTTCA (3) 1.9 0.0019 ONL GTTCTGACAG (3) 9.6 0.0096 ONL GTCATAGCTG (590) 5.7 0.0057 ONL GCAAGGAACA (14) 1.9 0.0019 ONL TTTTAGTGGA (4) 1.9 0.0019