Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.261025	Cdv3	carnitine deficiency-associated gene expressed in ventricle 3	9		321022
Mm.261025	2510010F10Rik	RIKEN cDNA 2510010F10 gene	9		77007
Mm.261025	C230084J24Rik	RIKEN cDNA C230084J24 gene	9		97532
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 90 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AATTTTCAAA (3) GTGTCTGATA (4) GTTCTGACAG (3) TCTGTACTGT TTAGTGGATT (2) 21.1 0.0211 Cb medulloblastoma CCTGAGAACC (3) GTTCTGACAA GTTCTGACAG (3) TTTTAGTGGA (3) 13.8 0.0138 P8 GC+1d culture GTGTCTGATA (4) GTTCTGACAA GTTCTGACAG (3) TTAGTGGATT (2) TTTTAGTGGA (3) 28.4 0.0284 P8 GC+SHH+1d culture CCTGAGAACC (3) GTGTCTGATA (4) GTTCTGACAG (3) TTTCTGTTCA (3) TTTTCTGTTC (4) 25.8 0.0258 3T3 fibroblasts GTCATAGCTG (2) GTGTCTGATA (4) GTTCTGACAG (3) 24.5 0.0245 E15 cortex GTCATAGCTG (2) GTTCTGACAG (3) TCTGTACTGT 19.7 0.0197 P1 cortex GTGTCTGATA (4) GTTCTGACAA GTTCTGACAG (3) 40.8 0.0408 Hypothalamus GCAAGGAACA (4) GTGTCTGATA (4) GTTCTGACAG (3) 12.7 0.0127 E12.5 retina AATTTTCAAA (3) CCTGAGAACC (3) CTTGGCAGTG GTGTCTGATA (4) GTTCTGACAA GTTCTGACAG (3) GTTTTGACAG (3) TTTAGTGGAT (4) 45.2 0.0452 E14.5 retina GTTCTGACAG (3) TTAGTGGATT (2) 12.7 0.0127 E16.5 retina AATTTTCAAA (3) GTGTCTGATA (4) GTTCTGACAG (3) TTAGTGGATT (2) TTTATTGATT 34.3 0.0343 E18.5 retina CCTGAGAACC (3) GTGTCTGATA (4) GTTCTGACAG (3) TTTTCTGTTC (4) 21.8 0.0218 P0.5 retina GCAAGGAACA (4) GTCATAGCTG (2) GTGTCTGATA (4) GTTCTGACAG (3) GTTTTGACAG (3) 23.7 0.0237 P2.5 retina AATTTTCAAA (3) CTTGGCAGTG GTCATAGCTG (2) GTTCTGACAG (3) TTTAGTGGAT (4) TTTATTGATT TTTTCTGTTC (4) 21.2 0.0212 P4.5 retina AATTTTCAAA (3) CCTGAGAACC (3) GTCATAGCTG (2) GTGTCTGATA (4) GTTCTGACAG (3) TCTGTACTGT 29.8 0.0298 P6.5 retina GTCATAGCTG (2) GTGTCTGATA (4) GTTCTGACAG (3) 15 0.015 P10.5 crx- retina AATTTTCAAA (3) GCAAGGAACA (4) GTTCTGACAG (3) TTAGTGGATT (2) TTTCTGTTCA (3) 20.4 0.0204 P10.5 crx+ retina CCTGAGAACC (3) GTTCTGACAG (3) TTAGTGGATT (2) TTTATTGATT TTTTCTGTTC (4) 17.2 0.0172 Adult retinal GCAAGGAACA (4) GTCATAGCTG (2) GTTCTGACAG (3) TTAGTGGATT (2) TTTCTGTTCA (3) 11.3 0.0113 ONL GCAAGGAACA (4) GTCATAGCTG (2) GTTCTGACAG (3) TTTTAGTGGA (3) 19.1 0.0191