Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.261395	9630030I15Rik	RIKEN cDNA 9630030I15 gene	10		319253
Mm.261395	Hsf2	heat shock factor 2	10		15500
Gene Ontology	cytoplasm | DNA binding | nucleus | protein folding | regulation of transcription, DNA-dependent | response to unfolded protein | spermatogenesis | transcription factor activity
Human Homolog	HSF2[heat shock transcription factor 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 40 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTGGCACACA (30) 6.5 0.0065 P8 Cb GC GTATTTAGTA (3) 4.9 0.0049 P8 Cb GC AAGTGGTTTT (4) 1.6 0.0016 P8 Cb GC TCTTTGTTGG (6) 1.6 0.0016 Cb medulloblastoma GTGGCACACA (30) 11.6 0.0116 P8 GC+1d culture GTGGCACACA (30) 13.7 0.0137 P8 GC+1d culture AAATATTACA (2) 1.1 0.0011 P8 GC+1d culture GTATTTAGTA (3) 1.1 0.0011 P8 GC+SHH+1d culture GTATTTAGTA (3) 2.3 0.0023 P8 GC+SHH+1d culture GTGGCACACA (30) 2.3 0.0023 3T3 fibroblasts GTGGCACACA (30) 14 0.014 E15 cortex GTGGCACACA (30) 24.7 0.0247 P1 cortex GTGGCACACA (30) 4.5 0.0045 P1 cortex TCTTTGTTGG (6) 4.5 0.0045 Hypothalamus GTGGCACACA (30) 7.2 0.0072 E12.5 retina GTGGCACACA (30) 11.3 0.0113 E12.5 retina GTATTTAGTA (3) 7.5 0.0075 E14.5 retina GTGGCACACA (30) 18.2 0.0182 E14.5 retina GTATTTAGTA (3) 3.6 0.0036 E14.5 retina TCTTTGTTGG (6) 1.8 0.0018 E16.5 retina GTGGCACACA (30) 9.1 0.0091 E16.5 retina AAATATTACA (2) 1.8 0.0018 E18.5 retina GTATTTAGTA (3) 5.5 0.0055 E18.5 retina GTGGCACACA (30) 5.5 0.0055 P0.5 retina GTGGCACACA (30) 11.8 0.0118 P0.5 retina GTATTTAGTA (3) 2 0.002 P2.5 retina GTGGCACACA (30) 17.6 0.0176 P2.5 retina AAGTGGTTTT (4) 1.8 0.0018 P4.5 retina GTGGCACACA (30) 11.9 0.0119 P4.5 retina GTATTTAGTA (3) 9.9 0.0099 P4.5 retina AAATATTACA (2) 2 0.002 P6.5 retina GTGGCACACA (30) 26.7 0.0267 P6.5 retina AAATATTACA (2) 1.7 0.0017 P10.5 crx- retina GTGGCACACA (30) 13 0.013 P10.5 crx- retina GTATTTAGTA (3) 3.7 0.0037 P10.5 crx+ retina GTGGCACACA (30) 7.7 0.0077 Adult retinal GTGGCACACA (30) 5.6 0.0056 ONL GTGGCACACA (30) 24.9 0.0249 ONL AAGTGGTTTT (4) 1.9 0.0019 ONL GTATTTAGTA (3) 1.9 0.0019