Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.261620
D11Wsu99e
DNA segment, Chr 11, Wayne State University 99, expressed
11
11 25.0 cM
28081
Mm.261620
4930539H15Rik
RIKEN cDNA 4930539H15 gene
11
78188
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 78 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TATTAATAAA
(
6
)
6.5
0.0065
P8 Cb GC
ATGCTCCTCC
(
2
)
3.3
0.0033
P8 Cb GC
GAAGGGCCAG
(
4
)
3.3
0.0033
Cb medulloblastoma
TATTAATAAA
(
6
)
32.4
0.0324
Cb medulloblastoma
ATGCTCCTCC
(
2
)
4.6
0.0046
Cb medulloblastoma
AGCGAGCGCC
(
2
)
2.3
0.0023
Cb medulloblastoma
CTCTGACCAG
(
3
)
2.3
0.0023
P8 GC+1d culture
ACAAGCACAA
(
5
)
4.6
0.0046
P8 GC+1d culture
ATGCTCCTCC
(
2
)
3.4
0.0034
P8 GC+1d culture
AGCGAGCGCC
(
2
)
1.1
0.0011
P8 GC+1d culture
CTCTGACCAG
(
3
)
1.1
0.0011
P8 GC+1d culture
GAAGGGCCAG
(
4
)
1.1
0.0011
P8 GC+1d culture
TATTAATAAA
(
6
)
1.1
0.0011
P8 GC+1d culture
TCGGCGGCCG
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
ATGCTCCTCC
(
2
)
5.9
0.0059
P8 GC+SHH+1d culture
ACAAGCACAA
(
5
)
3.5
0.0035
P8 GC+SHH+1d culture
GAAGGGCCAG
(
4
)
2.3
0.0023
P8 GC+SHH+1d culture
TATTAATAAA
(
6
)
2.3
0.0023
P8 GC+SHH+1d culture
TCGGCGGCCG
(
2
)
1.2
0.0012
3T3 fibroblasts
GAAGGGCCAG
(
4
)
3.5
0.0035
3T3 fibroblasts
TCGGCGGCCG
(
2
)
3.5
0.0035
E15 cortex
GAAGGGCCAG
(
4
)
14.8
0.0148
E15 cortex
AGCGAGCGCC
(
2
)
4.9
0.0049
E15 cortex
CTCTGACCAG
(
3
)
4.9
0.0049
P1 cortex
TATTAATAAA
(
6
)
13.6
0.0136
Hypothalamus
TATTAATAAA
(
6
)
45.3
0.0453
Hypothalamus
ACAAGCACAA
(
5
)
1.8
0.0018
Hypothalamus
ATGCTCCTCC
(
2
)
1.8
0.0018
Hypothalamus
TCGGCGGCCG
(
2
)
1.8
0.0018
E12.5 retina
ATGCTCCTCC
(
2
)
5.6
0.0056
E12.5 retina
CTCTGACCAG
(
3
)
3.8
0.0038
E12.5 retina
GAAGGGCCAG
(
4
)
3.8
0.0038
E12.5 retina
TATTAATAAA
(
6
)
1.9
0.0019
E14.5 retina
ACAAGCACAA
(
5
)
5.5
0.0055
E14.5 retina
ATGCTCCTCC
(
2
)
5.5
0.0055
E14.5 retina
GAAGGGCCAG
(
4
)
5.5
0.0055
E14.5 retina
TCGGCGGCCG
(
2
)
3.6
0.0036
E14.5 retina
TATTAATAAA
(
6
)
1.8
0.0018
E16.5 retina
TATTAATAAA
(
6
)
16.3
0.0163
E16.5 retina
ATGCTCCTCC
(
2
)
14.5
0.0145
E16.5 retina
ACAAGCACAA
(
5
)
1.8
0.0018
E16.5 retina
AGCGAGCGCC
(
2
)
1.8
0.0018
E16.5 retina
CTCTGACCAG
(
3
)
1.8
0.0018
E16.5 retina
TCGGCGGCCG
(
2
)
1.8
0.0018
E18.5 retina
TATTAATAAA
(
6
)
7.3
0.0073
E18.5 retina
ATGCTCCTCC
(
2
)
1.8
0.0018
E18.5 retina
GAAGGGCCAG
(
4
)
1.8
0.0018
P0.5 retina
ATGCTCCTCC
(
2
)
7.9
0.0079
P0.5 retina
CTCTGACCAG
(
3
)
3.9
0.0039
P0.5 retina
GAAGGGCCAG
(
4
)
3.9
0.0039
P0.5 retina
ACAAGCACAA
(
5
)
2
0.002
P0.5 retina
TATTAATAAA
(
6
)
2
0.002
P2.5 retina
GAAGGGCCAG
(
4
)
5.3
0.0053
P2.5 retina
TATTAATAAA
(
6
)
5.3
0.0053
P2.5 retina
ACAAGCACAA
(
5
)
3.5
0.0035
P2.5 retina
ATGCTCCTCC
(
2
)
3.5
0.0035
P2.5 retina
CTCTGACCAG
(
3
)
3.5
0.0035
P4.5 retina
TATTAATAAA
(
6
)
15.9
0.0159
P4.5 retina
ATGCTCCTCC
(
2
)
4
0.004
P4.5 retina
CTCTGACCAG
(
3
)
4
0.004
P4.5 retina
GAAGGGCCAG
(
4
)
4
0.004
P6.5 retina
TATTAATAAA
(
6
)
16.7
0.0167
P6.5 retina
ATGCTCCTCC
(
2
)
8.3
0.0083
P6.5 retina
CTCTGACCAG
(
3
)
1.7
0.0017
P6.5 retina
GAAGGGCCAG
(
4
)
1.7
0.0017
P6.5 retina
TCGGCGGCCG
(
2
)
1.7
0.0017
P10.5 crx- retina
TATTAATAAA
(
6
)
9.3
0.0093
P10.5 crx- retina
ATGCTCCTCC
(
2
)
1.9
0.0019
P10.5 crx+ retina
TATTAATAAA
(
6
)
9.6
0.0096
P10.5 crx+ retina
ATGCTCCTCC
(
2
)
5.8
0.0058
P10.5 crx+ retina
CTCTGACCAG
(
3
)
3.8
0.0038
Adult retinal
TATTAATAAA
(
6
)
3.7
0.0037
Adult retinal
ACAAGCACAA
(
5
)
1.9
0.0019
Adult retinal
CTCTGACCAG
(
3
)
1.9
0.0019
ONL
TATTAATAAA
(
6
)
15.3
0.0153
ONL
ATGCTCCTCC
(
2
)
3.8
0.0038
ONL
ACAAGCACAA
(
5
)
1.9
0.0019
ONL
AGCGAGCGCC
(
2
)
1.9
0.0019
