Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.261620	D11Wsu99e	DNA segment, Chr 11, Wayne State University 99, expressed	11	11 25.0 cM	28081
Mm.261620	4930539H15Rik	RIKEN cDNA 4930539H15 gene	11		78188
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 78 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATGCTCCTCC (2) GAAGGGCCAG (4) TATTAATAAA (6) 13.1 0.0131 Cb medulloblastoma AGCGAGCGCC (2) ATGCTCCTCC (2) CTCTGACCAG (3) TATTAATAAA (6) 41.6 0.0416 P8 GC+1d culture ACAAGCACAA (5) AGCGAGCGCC (2) ATGCTCCTCC (2) CTCTGACCAG (3) GAAGGGCCAG (4) TATTAATAAA (6) TCGGCGGCCG (2) 13.5 0.0135 P8 GC+SHH+1d culture ACAAGCACAA (5) ATGCTCCTCC (2) GAAGGGCCAG (4) TATTAATAAA (6) TCGGCGGCCG (2) 15.2 0.0152 3T3 fibroblasts GAAGGGCCAG (4) TCGGCGGCCG (2) 7 0.007 E15 cortex AGCGAGCGCC (2) CTCTGACCAG (3) GAAGGGCCAG (4) 24.6 0.0246 P1 cortex TATTAATAAA (6) 13.6 0.0136 Hypothalamus ACAAGCACAA (5) ATGCTCCTCC (2) TATTAATAAA (6) TCGGCGGCCG (2) 50.7 0.0507 E12.5 retina ATGCTCCTCC (2) CTCTGACCAG (3) GAAGGGCCAG (4) TATTAATAAA (6) 15.1 0.0151 E14.5 retina ACAAGCACAA (5) ATGCTCCTCC (2) GAAGGGCCAG (4) TATTAATAAA (6) TCGGCGGCCG (2) 21.9 0.0219 E16.5 retina ACAAGCACAA (5) AGCGAGCGCC (2) ATGCTCCTCC (2) CTCTGACCAG (3) TATTAATAAA (6) TCGGCGGCCG (2) 38 0.038 E18.5 retina ATGCTCCTCC (2) GAAGGGCCAG (4) TATTAATAAA (6) 10.9 0.0109 P0.5 retina ACAAGCACAA (5) ATGCTCCTCC (2) CTCTGACCAG (3) GAAGGGCCAG (4) TATTAATAAA (6) 19.7 0.0197 P2.5 retina ACAAGCACAA (5) ATGCTCCTCC (2) CTCTGACCAG (3) GAAGGGCCAG (4) TATTAATAAA (6) 21.1 0.0211 P4.5 retina ATGCTCCTCC (2) CTCTGACCAG (3) GAAGGGCCAG (4) TATTAATAAA (6) 27.9 0.0279 P6.5 retina ATGCTCCTCC (2) CTCTGACCAG (3) GAAGGGCCAG (4) TATTAATAAA (6) TCGGCGGCCG (2) 30.1 0.0301 P10.5 crx- retina ATGCTCCTCC (2) TATTAATAAA (6) 11.2 0.0112 P10.5 crx+ retina ATGCTCCTCC (2) CTCTGACCAG (3) TATTAATAAA (6) 19.2 0.0192 Adult retinal ACAAGCACAA (5) CTCTGACCAG (3) TATTAATAAA (6) 7.5 0.0075 ONL ACAAGCACAA (5) AGCGAGCGCC (2) ATGCTCCTCC (2) TATTAATAAA (6) 22.9 0.0229