Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.26237	Cry1	cryptochrome 1 (photolyase-like)	10	10 46.0 cM	12952
Gene Ontology	circadian rhythm | circadian rhythm | lyase activity | nucleus | protein binding | receptor activity
Human Homolog	CRY1[cryptochrome 1 (photolyase-like)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 35 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAATCAAGTG 4.9 0.0049 P8 Cb GC GGCCTCTGGC (2) 3.3 0.0033 Cb medulloblastoma GGCCTCTGGC (2) 2.3 0.0023 Cb medulloblastoma TAATCAAGTG 2.3 0.0023 P8 GC+1d culture GGCCTCTGGC (2) 16 0.016 P8 GC+SHH+1d culture GGCCTCTGGC (2) 15.2 0.0152 P8 GC+SHH+1d culture TAATCAAGTG 4.7 0.0047 E15 cortex GGCCTCTGGC (2) 9.9 0.0099 P1 cortex GGCCTCTGGC (2) 4.5 0.0045 Hypothalamus GGCCTCTGGC (2) 1.8 0.0018 E12.5 retina ATGAGAAATA (4) 1.9 0.0019 E12.5 retina GGCCTCTGGC (2) 1.9 0.0019 E16.5 retina ATTACGCCAA (233) 1.8 0.0018 E16.5 retina GGCCTCTGGC (2) 1.8 0.0018 E18.5 retina GGCCTCTGGC (2) 3.6 0.0036 E18.5 retina TAATCAAGTG 1.8 0.0018 P0.5 retina ATGAGAAATA (4) 3.9 0.0039 P0.5 retina ATTACGCCAA (233) 2 0.002 P0.5 retina GGCCTCTGGC (2) 2 0.002 P2.5 retina GGCCTCTGGC (2) 8.8 0.0088 P2.5 retina TAATCAAGTG 1.8 0.0018 P4.5 retina GGCCTCTGGC (2) 19.8 0.0198 P4.5 retina TAATCAAGTG 4 0.004 P4.5 retina ATGAGAAATA (4) 2 0.002 P6.5 retina GGCCTCTGGC (2) 11.7 0.0117 P10.5 crx- retina GGCCTCTGGC (2) 13 0.013 P10.5 crx- retina ATGAGAAATA (4) 1.9 0.0019 P10.5 crx- retina TAATCAAGTG 1.9 0.0019 P10.5 crx+ retina GGCCTCTGGC (2) 9.6 0.0096 P10.5 crx+ retina ATGAGAAATA (4) 5.8 0.0058 Adult retinal GGCCTCTGGC (2) 22.2 0.0222 Adult retinal ATTACGCCAA (233) 3.7 0.0037 Adult retinal TAATCAAGTG 1.9 0.0019 ONL GGCCTCTGGC (2) 7.7 0.0077 ONL TAATCAAGTG 5.7 0.0057