Mouse Retina SAGE Library
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Gene: 
Accession: 
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag: 
Cytoband (Mm): 
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene: 
Cytoband (Hs): 
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.26392
Thumpd1
THUMP domain containing 1
7
233802
Human Homolog
THUMPD1[THUMP domain containing 1]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 47 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CCTGTCCTGC
3.3
0.0033
P8 Cb GC
ATGGACTTTA (
13
)
1.6
0.0016
Cb medulloblastoma
CTGATCATCA (
4
)
2.3
0.0023
Cb medulloblastoma
GGGACAAAGA (
4
)
2.3
0.0023
P8 GC+1d culture
ATGGACTTTA (
13
)
2.3
0.0023
P8 GC+1d culture
CCTGTCCTGC
1.1
0.0011
P8 GC+1d culture
CTGATCATCA (
4
)
1.1
0.0011
P8 GC+SHH+1d culture
CCTGTCCTGC
8.2
0.0082
P8 GC+SHH+1d culture
ATTGTCTGTC (
3
)
2.3
0.0023
P8 GC+SHH+1d culture
ATGGACTTTA (
13
)
1.2
0.0012
P8 GC+SHH+1d culture
TGCTGTAGTG (
2
)
1.2
0.0012
3T3 fibroblasts
CCTGTCCTGC
10.5
0.0105
3T3 fibroblasts
GGGACAAAGA (
4
)
3.5
0.0035
E15 cortex
CCTGTCCTGC
9.9
0.0099
Hypothalamus
CCTGTCCTGC
1.8
0.0018
E12.5 retina
CCTGTCCTGC
3.8
0.0038
E12.5 retina
CTGATCGTCA
3.8
0.0038
E12.5 retina
TGCTGTAGTG (
2
)
3.8
0.0038
E12.5 retina
CTGATCATCA (
4
)
1.9
0.0019
E14.5 retina
CCTGTCCTGC
1.8
0.0018
E14.5 retina
TGCTGTAGTG (
2
)
1.8
0.0018
E16.5 retina
ATTGTCTGTC (
3
)
1.8
0.0018
E16.5 retina
CCTGTCCTGC
1.8
0.0018
E16.5 retina
CTGATCATCA (
4
)
1.8
0.0018
E16.5 retina
CTGATCGTCA
1.8
0.0018
P0.5 retina
CCTGTCCTGC
2
0.002
P0.5 retina
GGGACAAAGA (
4
)
2
0.002
P0.5 retina
TGCTGTAGTG (
2
)
2
0.002
P2.5 retina
ATGGACTTTA (
13
)
1.8
0.0018
P2.5 retina
CTGATCATCA (
4
)
1.8
0.0018
P2.5 retina
CTGATCGTCA
1.8
0.0018
P2.5 retina
TGCTGTAGTG (
2
)
1.8
0.0018
P4.5 retina
TGCTGTAGTG (
2
)
5.9
0.0059
P4.5 retina
CCTGTCCTGC
4
0.004
P4.5 retina
CTGATCGTCA
2
0.002
P6.5 retina
ATGGACTTTA (
13
)
1.7
0.0017
P6.5 retina
CTGATCGTCA
1.7
0.0017
P6.5 retina
TGCTGTAGTG (
2
)
1.7
0.0017
P10.5 crx- retina
CCTGTCCTGC
5.6
0.0056
P10.5 crx- retina
CTGATCGTCA
1.9
0.0019
P10.5 crx+ retina
CCTGTCCTGC
3.8
0.0038
P10.5 crx+ retina
CTGATCGTCA
3.8
0.0038
Adult retinal
CCTGTCCTGC
1.9
0.0019
Adult retinal
CTGATCATCA (
4
)
1.9
0.0019
Adult retinal
CTGATCGTCA
1.9
0.0019
ONL
CTGATCATCA (
4
)
1.9
0.0019
ONL
TGCTGTAGTG (
2
)
1.9
0.0019