Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.26392	Thumpd1	THUMP domain containing 1	7		233802
Human Homolog	THUMPD1[THUMP domain containing 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 47 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATGGACTTTA CCTGTCCTGC 4.9 0.0049 Cb medulloblastoma CTGATCATCA GGGACAAAGA 4.6 0.0046 P8 GC+1d culture ATGGACTTTA CCTGTCCTGC CTGATCATCA 4.5 0.0045 P8 GC+SHH+1d culture ATGGACTTTA ATTGTCTGTC CCTGTCCTGC TGCTGTAGTG 12.9 0.0129 3T3 fibroblasts CCTGTCCTGC GGGACAAAGA 14 0.014 E15 cortex CCTGTCCTGC 9.9 0.0099 Hypothalamus CCTGTCCTGC 1.8 0.0018 E12.5 retina CCTGTCCTGC CTGATCATCA CTGATCGTCA TGCTGTAGTG 13.3 0.0133 E14.5 retina CCTGTCCTGC TGCTGTAGTG 3.6 0.0036 E16.5 retina ATTGTCTGTC CCTGTCCTGC CTGATCATCA CTGATCGTCA 7.2 0.0072 P0.5 retina CCTGTCCTGC GGGACAAAGA TGCTGTAGTG 6 0.006 P2.5 retina ATGGACTTTA CTGATCATCA CTGATCGTCA TGCTGTAGTG 7.2 0.0072 P4.5 retina CCTGTCCTGC CTGATCGTCA TGCTGTAGTG 11.9 0.0119 P6.5 retina ATGGACTTTA CTGATCGTCA TGCTGTAGTG 5.1 0.0051 P10.5 crx- retina CCTGTCCTGC CTGATCGTCA 7.5 0.0075 P10.5 crx+ retina CCTGTCCTGC CTGATCGTCA 7.6 0.0076 Adult retinal CCTGTCCTGC CTGATCATCA CTGATCGTCA 5.7 0.0057 ONL CTGATCATCA TGCTGTAGTG 3.8 0.0038