| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AGAAATAAAG (4) GTAATCACGT TTTTTACCTT (2)
| 4.8 | 0.0048 |
| Cb medulloblastoma | ATGGTGCCTT (2)
| 2.3 | 0.0023 |
| P8 GC+1d culture | AGAAATAAAG (4) GGAATTTTTT (2) GTAATCACGT TTTTTACCTT (2)
| 10.1 | 0.0101 |
| P8 GC+SHH+1d culture | ACAAATTAAA (2) ACTGGAGGAA ATGGTGCCTT (2) CTTCAGTGTT (2) GGAATTTTTT (2) GTAATCACGT TTTTTACCTT (2)
| 16.4 | 0.0164 |
| 3T3 fibroblasts | ATGGTGCCTT (2) GTAATCACGT
| 7 | 0.007 |
| E15 cortex | ACAAATTAAA (2) ATGGTGCCTT (2)
| 9.8 | 0.0098 |
| P1 cortex | TTTTTACCTT (2)
| 4.5 | 0.0045 |
| Hypothalamus | AGAAATAAAG (4) CTTCAGTGTT (2) GTAATCACGT TTTTTACCTT (2)
| 9 | 0.009 |
| E12.5 retina | AGAAATAAAG (4) GGAAGCATAA GTAATCACGT
| 5.7 | 0.0057 |
| E14.5 retina | ATGGTGCCTT (2) CTTCAGTGTT (2)
| 5.4 | 0.0054 |
| E16.5 retina | CTTCAGTGTT (2) GTAATCACGT TTTTTACCTT (2)
| 12.6 | 0.0126 |
| E18.5 retina | AGAAATAAAG (4) GGAAGCATAA GTAATCACGT
| 9 | 0.009 |
| P0.5 retina | TTTTTACCTT (2)
| 2 | 0.002 |
| P2.5 retina | ACTGGAGGAA AGAAATAAAG (4) GGAAGCATAA GTAATCACGT TTTTTACCTT (2)
| 21.2 | 0.0212 |
| P4.5 retina | ATGGTGCCTT (2) TTTTTACCTT (2)
| 4 | 0.004 |
| P6.5 retina | GGAAGCATAA GTAATCACGT TTTTTACCTT (2)
| 8.4 | 0.0084 |
| P10.5 crx- retina | ACTGGAGGAA TTTTTACCTT (2)
| 20.5 | 0.0205 |
| P10.5 crx+ retina | GTAATCACGT TTTTTACCTT (2)
| 9.6 | 0.0096 |
| Adult retinal | CTTCAGTGTT (2) GTAATCACGT TTTTTACCTT (2)
| 9.4 | 0.0094 |
| ONL | ACTGGAGGAA AGAAATAAAG (4) GTAATCACGT
| 7.6 | 0.0076 |