Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.266867	Pck1	phosphoenolpyruvate carboxykinase 1, cytosolic	2	2 103.0 cM	18534
Gene Ontology	carboxy-lyase activity | gluconeogenesis | glycerol biosynthesis from pyruvate | GTP binding | kinase activity | lipid metabolism | lyase activity | phosphoenolpyruvate carboxykinase (GTP) activity | phosphoenolpyruvate carboxykinase activity
Human Homolog	PCK1[phosphoenolpyruvate carboxykinase 1 (soluble)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 136 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGTGTGTGTG (115) 27.7 0.0277 P8 Cb GC TTGCTTTTGG (2) 21.2 0.0212 P8 Cb GC ACTCGGATGC (3) 13.1 0.0131 P8 Cb GC TACACACACA (29) 1.6 0.0016 P8 Cb GC TTGCTTTGTT (10) 1.6 0.0016 Cb medulloblastoma TGTGTGTGTG (115) 30.1 0.0301 Cb medulloblastoma ACTCGGATGC (3) 13.9 0.0139 Cb medulloblastoma GGGGGGGGGG (112) 6.9 0.0069 Cb medulloblastoma TTGCTTTTGG (2) 6.9 0.0069 Cb medulloblastoma CTCACACAGA (3) 4.6 0.0046 Cb medulloblastoma CAGAAACAGA (8) 2.3 0.0023 Cb medulloblastoma GCCACGTATA (2) 2.3 0.0023 Cb medulloblastoma TACACACACA (29) 2.3 0.0023 P8 GC+1d culture TGTGTGTGTG (115) 27.4 0.0274 P8 GC+1d culture TTGCTTTTGG (2) 18.3 0.0183 P8 GC+1d culture ACTCGGATGC (3) 12.6 0.0126 P8 GC+1d culture GCCACGTATA (2) 3.4 0.0034 P8 GC+1d culture GGGGGGGGGG (112) 2.3 0.0023 P8 GC+1d culture CAGGAGGAGG (10) 1.1 0.0011 P8 GC+1d culture GAAAGGACAG (3) 1.1 0.0011 P8 GC+1d culture TCCAGGGTCA (3) 1.1 0.0011 P8 GC+SHH+1d culture TGTGTGTGTG (115) 28.1 0.0281 P8 GC+SHH+1d culture TTGCTTTTGG (2) 18.7 0.0187 P8 GC+SHH+1d culture ACTCGGATGC (3) 8.2 0.0082 P8 GC+SHH+1d culture GGGGGGGGGG (112) 7 0.007 P8 GC+SHH+1d culture GCCACGTATA (2) 2.3 0.0023 P8 GC+SHH+1d culture TCCAGGGTCA (3) 2.3 0.0023 P8 GC+SHH+1d culture TGCCCATCCC (6) 1.2 0.0012 3T3 fibroblasts TGTGTGTGTG (115) 28 0.028 3T3 fibroblasts ACTCGGATGC (3) 10.5 0.0105 3T3 fibroblasts GGGGGGGGGG (112) 3.5 0.0035 E15 cortex TTGCTTTTGG (2) 24.7 0.0247 E15 cortex ACTCGGATGC (3) 9.9 0.0099 E15 cortex CAGAAACAGA (8) 4.9 0.0049 E15 cortex GGGGGGGGGG (112) 4.9 0.0049 E15 cortex TGTGAGTGTG (3) 4.9 0.0049 E15 cortex TTGCTTTGTT (10) 4.9 0.0049 P1 cortex TGTGTGTGTG (115) 18.2 0.0182 P1 cortex TTGCTTTTGG (2) 13.6 0.0136 P1 cortex ACTCGGATGC (3) 4.5 0.0045 P1 cortex GCCACGTATA (2) 4.5 0.0045 Hypothalamus ACTCGGATGC (3) 27.2 0.0272 Hypothalamus TGTGTGTGTG (115) 25.4 0.0254 Hypothalamus TACACACACA (29) 7.2 0.0072 Hypothalamus TTGCTTTTGG (2) 3.6 0.0036 Hypothalamus GAAAGGACAG (3) 1.8 0.0018 Hypothalamus GGGGGGGGGG (112) 1.8 0.0018 E12.5 retina TGTGTGTGTG (115) 43.2 0.0432 E12.5 retina TTGCTTTTGG (2) 16.9 0.0169 E12.5 retina GCCACGTATA (2) 7.5 0.0075 E12.5 retina ACTCGGATGC (3) 1.9 0.0019 E12.5 retina CAGGAGGAGG (10) 1.9 0.0019 E12.5 retina TACACACACA (29) 1.9 0.0019 E14.5 retina TGTGTGTGTG (115) 54.7 0.0547 E14.5 retina TTGCTTTTGG (2) 12.8 0.0128 E14.5 retina GCCACGTATA (2) 9.1 0.0091 E14.5 retina TACACACACA (29) 5.5 0.0055 E14.5 retina ACTCGGATGC (3) 3.6 0.0036 E14.5 retina TGCCCATCCC (6) 1.8 0.0018 E16.5 retina TGTGTGTGTG (115) 39.8 0.0398 E16.5 retina TTGCTTTTGG (2) 29 0.029 E16.5 retina ACTCGGATGC (3) 14.5 0.0145 E16.5 retina GCCACGTATA (2) 7.2 0.0072 E16.5 retina TACACACACA (29) 3.6 0.0036 E16.5 retina TGCCCATCCC (6) 3.6 0.0036 E16.5 retina GGGGCACTGG (6) 1.8 0.0018 E16.5 retina TTGCTTTGTT (10) 1.8 0.0018 E18.5 retina TGTGTGTGTG (115) 47.3 0.0473 E18.5 retina ACTCGGATGC (3) 9.1 0.0091 E18.5 retina TTGCTTTTGG (2) 9.1 0.0091 E18.5 retina GCCACGTATA (2) 7.3 0.0073 E18.5 retina GAAAGGACAG (3) 1.8 0.0018 E18.5 retina TACACACACA (29) 1.8 0.0018 E18.5 retina TGTGAGTGTG (3) 1.8 0.0018 P0.5 retina TGTGTGTGTG (115) 21.6 0.0216 P0.5 retina ACTCGGATGC (3) 7.9 0.0079 P0.5 retina TACACACACA (29) 5.9 0.0059 P0.5 retina TTGCTTTTGG (2) 5.9 0.0059 P0.5 retina GCCACGTATA (2) 2 0.002 P0.5 retina TTGCTTTGTT (10) 2 0.002 P2.5 retina TGTGTGTGTG (115) 35.2 0.0352 P2.5 retina TTGCTTTTGG (2) 21.1 0.0211 P2.5 retina GCCACGTATA (2) 17.6 0.0176 P2.5 retina GGGGGGGGGG (112) 7 0.007 P2.5 retina ACTCGGATGC (3) 1.8 0.0018 P4.5 retina TGTGTGTGTG (115) 47.6 0.0476 P4.5 retina GCCACGTATA (2) 17.8 0.0178 P4.5 retina TTGCTTTTGG (2) 11.9 0.0119 P4.5 retina GGGGGGGGGG (112) 9.9 0.0099 P4.5 retina ACTCGGATGC (3) 5.9 0.0059 P4.5 retina TACACACACA (29) 4 0.004 P4.5 retina CAGAAACAGA (8) 2 0.002 P4.5 retina GAAAGGACAG (3) 2 0.002 P6.5 retina TGTGTGTGTG (115) 41.7 0.0417 P6.5 retina GCCACGTATA (2) 15 0.015 P6.5 retina TTGCTTTTGG (2) 10 0.01 P6.5 retina GGGGGGGGGG (112) 3.3 0.0033 P6.5 retina TACACACACA (29) 3.3 0.0033 P6.5 retina ACTCGGATGC (3) 1.7 0.0017 P6.5 retina CAGAAACAGA (8) 1.7 0.0017 P6.5 retina CAGGAGGAGG (10) 1.7 0.0017 P6.5 retina TTGCTTTGTT (10) 1.7 0.0017 P10.5 crx- retina TGTGTGTGTG (115) 59.4 0.0594 P10.5 crx- retina ACTCGGATGC (3) 57.6 0.0576 P10.5 crx- retina TTGCTTTTGG (2) 20.4 0.0204 P10.5 crx- retina GCCACGTATA (2) 11.1 0.0111 P10.5 crx- retina TACACACACA (29) 3.7 0.0037 P10.5 crx- retina CAGAAACAGA (8) 1.9 0.0019 P10.5 crx- retina TGCCCATCCC (6) 1.9 0.0019 P10.5 crx- retina TTGCTTTGTT (10) 1.9 0.0019 P10.5 crx+ retina TGTGTGTGTG (115) 44.2 0.0442 P10.5 crx+ retina ACTCGGATGC (3) 28.8 0.0288 P10.5 crx+ retina GCCACGTATA (2) 11.5 0.0115 P10.5 crx+ retina GGGGGGGGGG (112) 9.6 0.0096 P10.5 crx+ retina TTGCTTTTGG (2) 7.7 0.0077 P10.5 crx+ retina CAGGAGGAGG (10) 1.9 0.0019 P10.5 crx+ retina TACACACACA (29) 1.9 0.0019 P10.5 crx+ retina TGTGAGTGTG (3) 1.9 0.0019 Adult retinal TGTGTGTGTG (115) 53.7 0.0537 Adult retinal ACTCGGATGC (3) 16.7 0.0167 Adult retinal TACACACACA (29) 5.6 0.0056 Adult retinal GCCACGTATA (2) 3.7 0.0037 Adult retinal GGGGGGGGGG (112) 3.7 0.0037 Adult retinal TTGCTTTTGG (2) 3.7 0.0037 Adult retinal AGACCCCAGC (2) 1.9 0.0019 Adult retinal CAGGAGGAGG (10) 1.9 0.0019 ONL TGTGTGTGTG (115) 23 0.023 ONL TACACACACA (29) 13.4 0.0134 ONL GCCACGTATA (2) 5.7 0.0057 ONL ACTCGGATGC (3) 3.8 0.0038 ONL AGACCCCAGC (2) 3.8 0.0038 ONL CTCACACAGA (3) 1.9 0.0019 ONL GGGGCACTGG (6) 1.9 0.0019 ONL GGGGGGGGGG (112) 1.9 0.0019 ONL TGTGAGTGTG (3) 1.9 0.0019 ONL TTGCTTTTGG (2) 1.9 0.0019