Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.268092
2700007P21Rik
RIKEN cDNA 2700007P21 gene
2
212772
Human Homolog
FLJ38968[hypothetical protein FLJ38968]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 47 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGGTTGCTGG (
369
)
68.5
0.0685
P8 Cb GC
GAGTAATTCA (
3
)
4.9
0.0049
P8 Cb GC
CCACTGAAAA (
6
)
1.6
0.0016
P8 Cb GC
TGTTACCAGG
(
2
)
1.6
0.0016
Cb medulloblastoma
TGGTTGCTGG (
369
)
113.3
0.1133
Cb medulloblastoma
GAGTAATTCA (
3
)
2.3
0.0023
P8 GC+1d culture
TGGTTGCTGG (
369
)
57.1
0.0571
P8 GC+1d culture
GAGTAATTCA (
3
)
3.4
0.0034
P8 GC+SHH+1d culture
TGGTTGCTGG (
369
)
89
0.089
P8 GC+SHH+1d culture
GAGTAATTCA (
3
)
3.5
0.0035
3T3 fibroblasts
TGGTTGCTGG (
369
)
220.8
0.2208
3T3 fibroblasts
TGTTACCAGG
(
2
)
3.5
0.0035
E15 cortex
TGGTTGCTGG (
369
)
277.1
0.2771
P1 cortex
TGGTTGCTGG (
369
)
86.4
0.0864
Hypothalamus
TGGTTGCTGG (
369
)
349.6
0.3496
Hypothalamus
GAGTAATTCA (
3
)
7.2
0.0072
Hypothalamus
CTGGGTAATT
(
3
)
1.8
0.0018
Hypothalamus
TGTTACCAGG
(
2
)
1.8
0.0018
E12.5 retina
TGGTTGCTGG (
369
)
157.7
0.1577
E12.5 retina
GGAGTGTTGG
1.9
0.0019
E14.5 retina
TGGTTGCTGG (
369
)
936.5
0.9365
E14.5 retina
CTGGGTAATT
(
3
)
1.8
0.0018
E16.5 retina
TGGTTGCTGG (
369
)
767.9
0.7679
E16.5 retina
GAGTAATTCA (
3
)
1.8
0.0018
E18.5 retina
TGGTTGCTGG (
369
)
252.8
0.2528
E18.5 retina
TGTTACCAGG
(
2
)
1.8
0.0018
P0.5 retina
TGGTTGCTGG (
369
)
190.4
0.1904
P0.5 retina
TGTTACCAGG
(
2
)
3.9
0.0039
P2.5 retina
TGGTTGCTGG (
369
)
165.4
0.1654
P2.5 retina
GGAGTGTTGG
3.5
0.0035
P2.5 retina
CTGGGTAATT
(
3
)
1.8
0.0018
P2.5 retina
GAGTAATTCA (
3
)
1.8
0.0018
P2.5 retina
TGTTACCAGG
(
2
)
1.8
0.0018
P4.5 retina
TGGTTGCTGG (
369
)
150.6
0.1506
P4.5 retina
GAGTAATTCA (
3
)
4
0.004
P4.5 retina
TGTTACCAGG
(
2
)
4
0.004
P6.5 retina
TGGTTGCTGG (
369
)
156.7
0.1567
P6.5 retina
GAGTAATTCA (
3
)
3.3
0.0033
P6.5 retina
CCACTGAAAA (
6
)
1.7
0.0017
P10.5 crx- retina
TGGTTGCTGG (
369
)
280.5
0.2805
P10.5 crx- retina
GAGTAATTCA (
3
)
1.9
0.0019
P10.5 crx+ retina
TGGTTGCTGG (
369
)
101.9
0.1019
Adult retinal
TGGTTGCTGG (
369
)
214.8
0.2148
Adult retinal
GAGTAATTCA (
3
)
1.9
0.0019
ONL
TGGTTGCTGG (
369
)
398.4
0.3984
ONL
CCACTGAAAA (
6
)
1.9
0.0019
ONL
TGTTACCAGG
(
2
)
1.9
0.0019
