Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.268092
2700007P21Rik
RIKEN cDNA 2700007P21 gene
2
212772
Human Homolog
FLJ38968[hypothetical protein FLJ38968]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 47 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CCACTGAAAA (
4
)
GAGTAATTCA (
2
)
TGGTTGCTGG
TGTTACCAGG
76.6
0.0766
Cb medulloblastoma
GAGTAATTCA (
2
)
TGGTTGCTGG
115.6
0.1156
P8 GC+1d culture
GAGTAATTCA (
2
)
TGGTTGCTGG
60.5
0.0605
P8 GC+SHH+1d culture
GAGTAATTCA (
2
)
TGGTTGCTGG
92.5
0.0925
3T3 fibroblasts
TGGTTGCTGG
TGTTACCAGG
224.3
0.2243
E15 cortex
TGGTTGCTGG
277.1
0.2771
P1 cortex
TGGTTGCTGG
86.4
0.0864
Hypothalamus
CTGGGTAATT
(
3
)
GAGTAATTCA (
2
)
TGGTTGCTGG
TGTTACCAGG
360.4
0.3604
E12.5 retina
GGAGTGTTGG
TGGTTGCTGG
159.6
0.1596
E14.5 retina
CTGGGTAATT
(
3
)
TGGTTGCTGG
938.3
0.9383
E16.5 retina
GAGTAATTCA (
2
)
TGGTTGCTGG
769.7
0.7697
E18.5 retina
TGGTTGCTGG
TGTTACCAGG
254.6
0.2546
P0.5 retina
TGGTTGCTGG
TGTTACCAGG
194.3
0.1943
P2.5 retina
CTGGGTAATT
(
3
)
GAGTAATTCA (
2
)
GGAGTGTTGG
TGGTTGCTGG
TGTTACCAGG
174.3
0.1743
P4.5 retina
GAGTAATTCA (
2
)
TGGTTGCTGG
TGTTACCAGG
158.6
0.1586
P6.5 retina
CCACTGAAAA (
4
)
GAGTAATTCA (
2
)
TGGTTGCTGG
161.7
0.1617
P10.5 crx- retina
GAGTAATTCA (
2
)
TGGTTGCTGG
282.4
0.2824
P10.5 crx+ retina
TGGTTGCTGG
101.9
0.1019
Adult retinal
GAGTAATTCA (
2
)
TGGTTGCTGG
216.7
0.2167
ONL
CCACTGAAAA (
4
)
TGGTTGCTGG
TGTTACCAGG
402.2
0.4022
