Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.26834
1110008L20Rik
RIKEN cDNA 1110008L20 gene
14
68514
Mm.26834
C78339
expressed sequence C78339
13
97863
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 65 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GAAGTTTTTA (
4
)
22.8
0.0228
P8 Cb GC
AGCTCACCAA
(
4
)
1.6
0.0016
P8 Cb GC
TTTGCTTTTA (
4
)
1.6
0.0016
Cb medulloblastoma
GAAGTTTTTA (
4
)
9.2
0.0092
Cb medulloblastoma
GTGACAAAAT (
4
)
9.2
0.0092
Cb medulloblastoma
AGCTCACCAA
(
4
)
2.3
0.0023
Cb medulloblastoma
GAACATTTAA
(
3
)
2.3
0.0023
P8 GC+1d culture
AGCTCACCAA
(
4
)
4.6
0.0046
P8 GC+1d culture
GAAGTTTTTA (
4
)
4.6
0.0046
P8 GC+1d culture
GTGACAAAAT (
4
)
4.6
0.0046
P8 GC+1d culture
GCTACCTTTC (
3
)
1.1
0.0011
P8 GC+1d culture
GGAGTCCCAG
(
3
)
1.1
0.0011
P8 GC+1d culture
TTTGCTTTTA (
4
)
1.1
0.0011
P8 GC+SHH+1d culture
AGCTCACCAA
(
4
)
14.1
0.0141
P8 GC+SHH+1d culture
GAAGTTTTTA (
4
)
5.9
0.0059
P8 GC+SHH+1d culture
GTGACAAAAT (
4
)
5.9
0.0059
P8 GC+SHH+1d culture
GCTACCTTTC (
3
)
1.2
0.0012
P8 GC+SHH+1d culture
GGAGTCCCAG
(
3
)
1.2
0.0012
3T3 fibroblasts
AGCTCACCAA
(
4
)
7
0.007
E15 cortex
AGCTCACCAA
(
4
)
19.8
0.0198
E15 cortex
GAAGTTTTTA (
4
)
9.9
0.0099
P1 cortex
GCTACCTTTC (
3
)
9.1
0.0091
P1 cortex
AGCTCACCAA
(
4
)
4.5
0.0045
P1 cortex
GTGACAAAAT (
4
)
4.5
0.0045
Hypothalamus
AGCTCACCAA
(
4
)
5.4
0.0054
Hypothalamus
GTACACAGCT
(
4
)
3.6
0.0036
Hypothalamus
GAAGTTTTTA (
4
)
1.8
0.0018
Hypothalamus
GGAGTCCCAG
(
3
)
1.8
0.0018
E12.5 retina
AGCTCACCAA
(
4
)
15
0.015
E12.5 retina
GTGACAAAAT (
4
)
3.8
0.0038
E14.5 retina
AGCTCACCAA
(
4
)
7.3
0.0073
E14.5 retina
GTGACAAAAT (
4
)
5.5
0.0055
E14.5 retina
GAAGTTTTTA (
4
)
3.6
0.0036
E14.5 retina
GGAGTCCCAG
(
3
)
1.8
0.0018
E16.5 retina
AGCTCACCAA
(
4
)
12.7
0.0127
E16.5 retina
GTGACAAAAT (
4
)
1.8
0.0018
E18.5 retina
AGCTCACCAA
(
4
)
10.9
0.0109
E18.5 retina
GAAGTTTTTA (
4
)
5.5
0.0055
E18.5 retina
GAACATTTAA
(
3
)
1.8
0.0018
P0.5 retina
AGCTCACCAA
(
4
)
15.7
0.0157
P0.5 retina
GAAGTTTTTA (
4
)
2
0.002
P2.5 retina
AGCTCACCAA
(
4
)
17.6
0.0176
P2.5 retina
GTGACAAAAT (
4
)
3.5
0.0035
P2.5 retina
GTACACAGCT
(
4
)
1.8
0.0018
P2.5 retina
TTTGCTTTTA (
4
)
1.8
0.0018
P4.5 retina
AGCTCACCAA
(
4
)
11.9
0.0119
P4.5 retina
GAAGTTTTTA (
4
)
2
0.002
P4.5 retina
GGAGTCCCAG
(
3
)
2
0.002
P4.5 retina
GTGACAAAAT (
4
)
2
0.002
P4.5 retina
TTTGCTTTTA (
4
)
2
0.002
P6.5 retina
AGCTCACCAA
(
4
)
11.7
0.0117
P6.5 retina
GAAGTTTTTA (
4
)
1.7
0.0017
P6.5 retina
GTACACAGCT
(
4
)
1.7
0.0017
P6.5 retina
GTGACAAAAT (
4
)
1.7
0.0017
P10.5 crx- retina
GCTACCTTTC (
3
)
1.9
0.0019
P10.5 crx- retina
GTGACAAAAT (
4
)
1.9
0.0019
P10.5 crx+ retina
AGCTCACCAA
(
4
)
11.5
0.0115
P10.5 crx+ retina
GTGACAAAAT (
4
)
5.8
0.0058
P10.5 crx+ retina
GAAGTTTTTA (
4
)
1.9
0.0019
Adult retinal
GTACACAGCT
(
4
)
1.9
0.0019
Adult retinal
GTGACAAAAT (
4
)
1.9
0.0019
Adult retinal
TTTGCTTTTA (
4
)
1.9
0.0019
ONL
AGCTCACCAA
(
4
)
1.9
0.0019
ONL
GAACATTTAA
(
3
)
1.9
0.0019
ONL
GTGACAAAAT (
4
)
1.9
0.0019
