| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AGGAGAAAGT TTTCTTGTTT (2) TTTGCTTTAA (3) TTTGCTTTTA TTTTTGGCAG
| 55.5 | 0.0555 |
| Cb medulloblastoma | TTTGCTTTAA (3)
| 6.9 | 0.0069 |
| P8 GC+1d culture | TTTCTTGTTT (2) TTTGCTTTAA (3) TTTGCTTTTA TTTTTGGCAG
| 25.1 | 0.0251 |
| P8 GC+SHH+1d culture | CTTACACTTA GTGCGGACCA TAAATTTGGG TTTGCTTTAA (3) TTTTTGGCAG
| 57.3 | 0.0573 |
| 3T3 fibroblasts | CTTACACTTA TTTGCTTTAA (3) TTTTTGGCAG
| 10.5 | 0.0105 |
| E15 cortex | TTTTTGGCAG
| 9.9 | 0.0099 |
| P1 cortex | TTTCTTGTTT (2) TTTGCTTTAA (3)
| 22.7 | 0.0227 |
| Hypothalamus | TTTGCTTTAA (3)
| 21.7 | 0.0217 |
| E12.5 retina | AGGAGAAAGT TAAATTTGGG TTTGCTTTAA (3) TTTTTGGCAG
| 33.8 | 0.0338 |
| E14.5 retina | AGGAGAAAGT CTTACACTTA TAAATTTGGG TTTCTTGTTT (2) TTTGCTTTAA (3)
| 60 | 0.06 |
| E16.5 retina | TTTCTTGTTT (2) TTTGCTTTAA (3)
| 48.9 | 0.0489 |
| E18.5 retina | AGGAGAAAGT GTGCGGACCA TAAATTTGGG TTTCTTGTTT (2) TTTGCTTTAA (3) TTTTTGGCAG
| 59.9 | 0.0599 |
| P0.5 retina | AGGAGAAAGT TTTCTTGTTT (2) TTTGCTTTAA (3) TTTTTGGCAG
| 27.6 | 0.0276 |
| P2.5 retina | TTTCTTGTTT (2) TTTGCTTTAA (3) TTTGCTTTTA TTTTTGGCAG
| 51 | 0.051 |
| P4.5 retina | ATAGAGGTCC TAAATTTGGG TTTGCTTTAA (3) TTTGCTTTTA
| 53.6 | 0.0536 |
| P6.5 retina | TTTCTTGTTT (2) TTTGCTTTAA (3) TTTTTGGCAG
| 55 | 0.055 |
| P10.5 crx- retina | TAAATTTGGG TTTCTTGTTT (2) TTTGCTTTAA (3)
| 35.4 | 0.0354 |
| P10.5 crx+ retina | ATAGAGGTCC TTTGCTTTAA (3)
| 32.6 | 0.0326 |
| Adult retinal | TTTGCTTTAA (3) TTTGCTTTTA
| 9.3 | 0.0093 |
| ONL | TTTCTTGTTT (2) TTTGCTTTAA (3)
| 17.2 | 0.0172 |