Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.269649	Pfkl	phosphofructokinase, liver, B-type	10	10 41.7 cM	18641
Gene Ontology	6-phosphofructokinase activity | 6-phosphofructokinase complex | ATP binding | catalytic activity | cytoplasm | glycolysis | kinase activity | magnesium ion binding | transferase activity
Human Homolog	PFKL[phosphofructokinase, liver]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 140 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGTTGCTGG (369) 68.5 0.0685 P8 Cb GC GTAAAAAAAA (28) 55.5 0.0555 P8 Cb GC TTTGTGGGGG (7) 8.2 0.0082 P8 Cb GC CAGACTATGT (4) 6.5 0.0065 P8 Cb GC GTCAAAAAAA (15) 4.9 0.0049 P8 Cb GC GCAACAAGGC (3) 1.6 0.0016 P8 Cb GC GCTAAAGACC (4) 1.6 0.0016 Cb medulloblastoma GTAAAAAAAA (28) 129.5 0.1295 Cb medulloblastoma TGGTTGCTGG (369) 113.3 0.1133 Cb medulloblastoma CAGACTATGT (4) 6.9 0.0069 Cb medulloblastoma GTCAAAAAAA (15) 6.9 0.0069 Cb medulloblastoma ACCAGAGGAG 2.3 0.0023 Cb medulloblastoma TTTGTGGGGG (7) 2.3 0.0023 P8 GC+1d culture GTAAAAAAAA (28) 74.2 0.0742 P8 GC+1d culture TGGTTGCTGG (369) 57.1 0.0571 P8 GC+1d culture GTCAAAAAAA (15) 12.6 0.0126 P8 GC+1d culture CAGACTATGT (4) 10.3 0.0103 P8 GC+1d culture GCAGACTATG (2) 2.3 0.0023 P8 GC+1d culture GGAAAATCCC (9) 2.3 0.0023 P8 GC+1d culture TTTGTGGGGG (7) 1.1 0.0011 P8 GC+SHH+1d culture GTAAAAAAAA (28) 132.3 0.1323 P8 GC+SHH+1d culture TGGTTGCTGG (369) 89 0.089 P8 GC+SHH+1d culture CAGACTATGT (4) 16.4 0.0164 P8 GC+SHH+1d culture GTCAAAAAAA (15) 15.2 0.0152 P8 GC+SHH+1d culture GCTAAAGACC (4) 3.5 0.0035 P8 GC+SHH+1d culture TTTGTGGGGG (7) 2.3 0.0023 P8 GC+SHH+1d culture GGAAAATCCC (9) 1.2 0.0012 3T3 fibroblasts TGGTTGCTGG (369) 220.8 0.2208 3T3 fibroblasts GTAAAAAAAA (28) 7 0.007 3T3 fibroblasts GCAGACTATG (2) 3.5 0.0035 3T3 fibroblasts TTTGTGGGGG (7) 3.5 0.0035 E15 cortex TGGTTGCTGG (369) 277.1 0.2771 E15 cortex GTAAAAAAAA (28) 34.6 0.0346 E15 cortex GTCAAAAAAA (15) 24.7 0.0247 E15 cortex GGAAAATCCC (9) 4.9 0.0049 P1 cortex TGGTTGCTGG (369) 86.4 0.0864 P1 cortex GTAAAAAAAA (28) 36.4 0.0364 P1 cortex GTCAAAAAAA (15) 22.7 0.0227 P1 cortex GGAAAATCCC (9) 9.1 0.0091 P1 cortex TGCCTCTCCC (3) 4.5 0.0045 P1 cortex TTTGTGGGGG (7) 4.5 0.0045 Hypothalamus TGGTTGCTGG (369) 349.6 0.3496 Hypothalamus GTAAAAAAAA (28) 99.6 0.0996 Hypothalamus GCTAAAGACC (4) 12.7 0.0127 Hypothalamus GTCAAAAAAA (15) 5.4 0.0054 Hypothalamus CAGACTATGT (4) 1.8 0.0018 Hypothalamus GACGCCATCA (4) 1.8 0.0018 Hypothalamus GCAGACTATG (2) 1.8 0.0018 Hypothalamus TTTGTGGGGG (7) 1.8 0.0018 E12.5 retina TGGTTGCTGG (369) 157.7 0.1577 E12.5 retina GTAAAAAAAA (28) 41.3 0.0413 E12.5 retina CAGACTATGT (4) 5.6 0.0056 E12.5 retina GCAGACTATG (2) 1.9 0.0019 E12.5 retina GCTAAAGACC (4) 1.9 0.0019 E12.5 retina GTCAAAAAAA (15) 1.9 0.0019 E12.5 retina GTCACTGGGA (4) 1.9 0.0019 E12.5 retina TTTGTGGGGG (7) 1.9 0.0019 E14.5 retina TGGTTGCTGG (369) 936.5 0.9365 E14.5 retina GTAAAAAAAA (28) 82 0.082 E14.5 retina GTCAAAAAAA (15) 10.9 0.0109 E14.5 retina CAGACTATGT (4) 9.1 0.0091 E14.5 retina CCAGCAGCTG (3) 3.6 0.0036 E14.5 retina GCTAAAGACC (4) 3.6 0.0036 E14.5 retina GTCACTGGGA (4) 3.6 0.0036 E16.5 retina TGGTTGCTGG (369) 767.9 0.7679 E16.5 retina GTAAAAAAAA (28) 68.8 0.0688 E16.5 retina GTCAAAAAAA (15) 10.9 0.0109 E16.5 retina GCTAAAGACC (4) 7.2 0.0072 E16.5 retina GTCACTGGGA (4) 5.4 0.0054 E16.5 retina ACCAGAGGAG 1.8 0.0018 E16.5 retina CAGACTATGT (4) 1.8 0.0018 E16.5 retina CCAGCAGCTG (3) 1.8 0.0018 E16.5 retina GCAGACTATG (2) 1.8 0.0018 E18.5 retina TGGTTGCTGG (369) 252.8 0.2528 E18.5 retina GTAAAAAAAA (28) 189.2 0.1892 E18.5 retina GTCAAAAAAA (15) 30.9 0.0309 E18.5 retina CAGACTATGT (4) 5.5 0.0055 E18.5 retina GTCACTGGGA (4) 5.5 0.0055 E18.5 retina GCAGACTATG (2) 1.8 0.0018 E18.5 retina GCTAAAGACC (4) 1.8 0.0018 P0.5 retina TGGTTGCTGG (369) 190.4 0.1904 P0.5 retina GTAAAAAAAA (28) 51 0.051 P0.5 retina CAGACTATGT (4) 9.8 0.0098 P0.5 retina GTCAAAAAAA (15) 7.9 0.0079 P0.5 retina GCAGACTATG (2) 5.9 0.0059 P0.5 retina TTTGTGGGGG (7) 2 0.002 P2.5 retina TGGTTGCTGG (369) 165.4 0.1654 P2.5 retina GTAAAAAAAA (28) 103.8 0.1038 P2.5 retina CAGACTATGT (4) 14.1 0.0141 P2.5 retina GTCAAAAAAA (15) 10.6 0.0106 P2.5 retina GCAGACTATG (2) 5.3 0.0053 P2.5 retina GCTAAAGACC (4) 1.8 0.0018 P2.5 retina GGAAAATCCC (9) 1.8 0.0018 P4.5 retina TGGTTGCTGG (369) 150.6 0.1506 P4.5 retina GTAAAAAAAA (28) 142.7 0.1427 P4.5 retina CAGACTATGT (4) 4 0.004 P4.5 retina GTCACTGGGA (4) 4 0.004 P4.5 retina GCAGACTATG (2) 2 0.002 P4.5 retina GTCAAAAAAA (15) 2 0.002 P4.5 retina TTTGTGGGGG (7) 2 0.002 P6.5 retina TGGTTGCTGG (369) 156.7 0.1567 P6.5 retina GTAAAAAAAA (28) 66.7 0.0667 P6.5 retina GTCAAAAAAA (15) 10 0.01 P6.5 retina GCAGACTATG (2) 6.7 0.0067 P6.5 retina CAGACTATGT (4) 5 0.005 P6.5 retina GTCACTGGGA (4) 3.3 0.0033 P6.5 retina GCAACAAGGC (3) 1.7 0.0017 P6.5 retina GGAAAATCCC (9) 1.7 0.0017 P10.5 crx- retina TGGTTGCTGG (369) 280.5 0.2805 P10.5 crx- retina GTAAAAAAAA (28) 26 0.026 P10.5 crx- retina GTCAAAAAAA (15) 3.7 0.0037 P10.5 crx- retina ACCAGAGGAG 1.9 0.0019 P10.5 crx- retina CAGACTATGT (4) 1.9 0.0019 P10.5 crx- retina GCTAAAGACC (4) 1.9 0.0019 P10.5 crx- retina GTACTGAGCT (2) 1.9 0.0019 P10.5 crx- retina TGCCTCTCCC (3) 1.9 0.0019 P10.5 crx+ retina TGGTTGCTGG (369) 101.9 0.1019 P10.5 crx+ retina GTAAAAAAAA (28) 55.8 0.0558 P10.5 crx+ retina GTCAAAAAAA (15) 5.8 0.0058 P10.5 crx+ retina GCAGACTATG (2) 3.8 0.0038 P10.5 crx+ retina CAGACTATGT (4) 1.9 0.0019 P10.5 crx+ retina GCTAAAGACC (4) 1.9 0.0019 P10.5 crx+ retina GTCACTGGGA (4) 1.9 0.0019 Adult retinal TGGTTGCTGG (369) 214.8 0.2148 Adult retinal GTAAAAAAAA (28) 22.2 0.0222 Adult retinal GTCAAAAAAA (15) 7.4 0.0074 Adult retinal TTTGTGGGGG (7) 3.7 0.0037 Adult retinal ACCAGAGGAG 1.9 0.0019 Adult retinal ATGGCTTTGA (4) 1.9 0.0019 Adult retinal CAGACTATGT (4) 1.9 0.0019 Adult retinal GCAGACTATG (2) 1.9 0.0019 Adult retinal GGAAAATCCC (9) 1.9 0.0019 ONL TGGTTGCTGG (369) 398.4 0.3984 ONL GTAAAAAAAA (28) 24.9 0.0249 ONL GTACTGAGCT (2) 3.8 0.0038 ONL ATGGCTTTGA (4) 1.9 0.0019 ONL GCAGACTATG (2) 1.9 0.0019 ONL GTCAAAAAAA (15) 1.9 0.0019 ONL TGCCTCTCCC (3) 1.9 0.0019 ONL TTTGTGGGGG (7) 1.9 0.0019