Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.27005	Vsnl1	visinin-like 1	12		26950
Gene Ontology	calcium ion binding
Human Homolog	VSNL1[visinin-like 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 48 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAGGACCTGG (5) 24.5 0.0245 P8 Cb GC TAATATTTAA 1.6 0.0016 P8 Cb GC TTTTGCTAAT (2) 1.6 0.0016 Cb medulloblastoma TAATATTTAA 25.4 0.0254 Cb medulloblastoma AGAATGTCAT 4.6 0.0046 Cb medulloblastoma GAGGACCTGG (5) 4.6 0.0046 Cb medulloblastoma CCTTTTGGGT 2.3 0.0023 P8 GC+1d culture GAGGACCTGG (5) 13.7 0.0137 P8 GC+1d culture TTTTGCTAAT (2) 1.1 0.0011 P8 GC+SHH+1d culture GAGGACCTGG (5) 22.2 0.0222 P8 GC+SHH+1d culture TTTTGCTAAT (2) 3.5 0.0035 3T3 fibroblasts GAGGACCTGG (5) 3.5 0.0035 E15 cortex GAGGACCTGG (5) 24.7 0.0247 P1 cortex GAGGACCTGG (5) 13.6 0.0136 P1 cortex TAATATTTAA 9.1 0.0091 Hypothalamus TAATATTTAA 38 0.038 Hypothalamus GAGGACCTGG (5) 7.2 0.0072 Hypothalamus CCATATTGAT 5.4 0.0054 Hypothalamus AGAATGTCAT 1.8 0.0018 Hypothalamus TTTTGCTAAT (2) 1.8 0.0018 E12.5 retina GAGGACCTGG (5) 11.3 0.0113 E14.5 retina GAGGACCTGG (5) 10.9 0.0109 E14.5 retina TAATATTTAA 1.8 0.0018 E16.5 retina GAGGACCTGG (5) 18.1 0.0181 E16.5 retina AGAATGTCAT 1.8 0.0018 E16.5 retina TAATATTTAA 1.8 0.0018 E18.5 retina GAGGACCTGG (5) 12.7 0.0127 E18.5 retina TAATATTTAA 1.8 0.0018 P0.5 retina GAGGACCTGG (5) 15.7 0.0157 P2.5 retina GAGGACCTGG (5) 22.9 0.0229 P2.5 retina CCTTTTGGGT 1.8 0.0018 P2.5 retina TTTTGCTAAT (2) 1.8 0.0018 P4.5 retina GAGGACCTGG (5) 25.8 0.0258 P4.5 retina TTTTGCTAAT (2) 2 0.002 P6.5 retina GAGGACCTGG (5) 10 0.01 P6.5 retina AGAATGTCAT 1.7 0.0017 P6.5 retina TAATATTTAA 1.7 0.0017 P10.5 crx- retina GAGGACCTGG (5) 7.4 0.0074 P10.5 crx- retina CCTTTTGGGT 1.9 0.0019 P10.5 crx- retina TAATATTTAA 1.9 0.0019 P10.5 crx+ retina GAGGACCTGG (5) 5.8 0.0058 P10.5 crx+ retina TAATATTTAA 5.8 0.0058 P10.5 crx+ retina AGAATGTCAT 1.9 0.0019 P10.5 crx+ retina CCTTTTGGGT 1.9 0.0019 Adult retinal GAGGACCTGG (5) 7.4 0.0074 Adult retinal CCTTTTGGGT 1.9 0.0019 Adult retinal TTTTGCTAAT (2) 1.9 0.0019 ONL GAGGACCTGG (5) 3.8 0.0038