| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAGCTGAGAG (5) ATGCAGGGAT (5) TAACTTGTAG (6) TGCTCGCAAT (4)
| 27.7 | 0.0277 |
| Cb medulloblastoma | ATGCAGGGAT (5) CATTTGTCAG (4) TAACTTGTAG (6) TGCTCGCAAT (4)
| 13.8 | 0.0138 |
| P8 GC+1d culture | AAGCTGAGAG (5) TAACTTGTAG (6) TGCTCGCAAT (4)
| 26.2 | 0.0262 |
| P8 GC+SHH+1d culture | AGCTTTGAAA (4) GATCATAGCT (4) TAACTTGTAG (6) TGCTCGCAAT (4)
| 25.8 | 0.0258 |
| 3T3 fibroblasts | AAGCTGAGAG (5) TAACTTGTAG (6) TGCTCGCAAT (4)
| 10.5 | 0.0105 |
| E15 cortex | TAACTTGTAG (6) TGCTCGCAAT (4)
| 19.7 | 0.0197 |
| P1 cortex | AAGCTGAGAG (5) TAACTTGTAG (6)
| 9 | 0.009 |
| Hypothalamus | GATCATAGCT (4) TAACTTGTAG (6)
| 19.9 | 0.0199 |
| E12.5 retina | ATGCAGGGAT (5) TAACTTGTAG (6)
| 24.4 | 0.0244 |
| E14.5 retina | TAACTTGTAG (6)
| 18.2 | 0.0182 |
| E16.5 retina | TAACTTGTAG (6)
| 21.7 | 0.0217 |
| E18.5 retina | TAACTTGTAG (6)
| 50.9 | 0.0509 |
| P0.5 retina | TAACTTGTAG (6) TGCTCGCAAT (4)
| 19.7 | 0.0197 |
| P2.5 retina | ATGCAGGGAT (5) TAACTTGTAG (6) TGCTCGCAAT (4)
| 35.2 | 0.0352 |
| P4.5 retina | ATGCAGGGAT (5) GATCATAGCT (4) TAACTTGTAG (6)
| 49.6 | 0.0496 |
| P6.5 retina | AAGCTGAGAG (5) AGCTTTGAAA (4) ATGCAGGGAT (5) TAACTTGTAG (6) TGCTCGCAAT (4)
| 36.7 | 0.0367 |
| P10.5 crx- retina | ATGCAGGGAT (5) TAACTTGTAG (6)
| 18.6 | 0.0186 |
| P10.5 crx+ retina | AGCTTTGAAA (4) CATTTGTCAG (4) TAACTTGTAG (6) TGCTCGCAAT (4)
| 26.8 | 0.0268 |
| Adult retinal | TAACTTGTAG (6) TGCTCGCAAT (4)
| 14.8 | 0.0148 |
| ONL | AAGCTGAGAG (5) GATCATAGCT (4) TAACTTGTAG (6) TGCTCGCAAT (4)
| 21 | 0.021 |