Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.270781	Snx11	sorting nexin 11	11		74479
Human Homolog	SNX11[sorting nexin 11]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 40 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTTTTTTTTT (433) 4.9 0.0049 Cb medulloblastoma CAGCCAAGGT (2) 2.3 0.0023 Cb medulloblastoma CCCAGCTCTG (8) 2.3 0.0023 Cb medulloblastoma GCTGTGCTTT (4) 2.3 0.0023 Cb medulloblastoma TTTTTTTTTT (433) 2.3 0.0023 P8 GC+1d culture TTTTTTTTTT (433) 13.7 0.0137 P8 GC+1d culture CCCAGCTCTG (8) 2.3 0.0023 P8 GC+1d culture ACGGTGTCCG 1.1 0.0011 P8 GC+1d culture GAAGGAAGAG (10) 1.1 0.0011 P8 GC+SHH+1d culture TTTTTTTTTT (433) 5.9 0.0059 P8 GC+SHH+1d culture CCCAGCTCTG (8) 3.5 0.0035 P8 GC+SHH+1d culture GAAGGAAGAG (10) 1.2 0.0012 P8 GC+SHH+1d culture GCTGTGCTTT (4) 1.2 0.0012 E15 cortex TTTTTTTTTT (433) 4.9 0.0049 P1 cortex ACGGTGTCCG 4.5 0.0045 P1 cortex TTTTTTTTTT (433) 4.5 0.0045 Hypothalamus TTTTTTTTTT (433) 7.2 0.0072 Hypothalamus CCCAGCTCTG (8) 3.6 0.0036 Hypothalamus CAGCCAAGGT (2) 1.8 0.0018 E12.5 retina TTTTTTTTTT (433) 7.5 0.0075 E12.5 retina GCTGTGCTTT (4) 1.9 0.0019 E12.5 retina GGCTTGCTGG (3) 1.9 0.0019 E14.5 retina TTTTTTTTTT (433) 23.7 0.0237 E16.5 retina TTTTTTTTTT (433) 5.4 0.0054 E16.5 retina GAAGGAAGAG (10) 1.8 0.0018 E18.5 retina TTTTTTTTTT (433) 10.9 0.0109 P0.5 retina TTTTTTTTTT (433) 9.8 0.0098 P0.5 retina ACGGTGTCCG 2 0.002 P2.5 retina TTTTTTTTTT (433) 7 0.007 P4.5 retina TTTTTTTTTT (433) 9.9 0.0099 P6.5 retina TTTTTTTTTT (433) 8.3 0.0083 P6.5 retina GGCTTGCTGG (3) 5 0.005 P10.5 crx+ retina TTTTTTTTTT (433) 3.8 0.0038 Adult retinal TTTTTTTTTT (433) 7.4 0.0074 Adult retinal ACGGTGTCCG 1.9 0.0019 Adult retinal CAGCCAAGGT (2) 1.9 0.0019 Adult retinal CCCAGCTCTG (8) 1.9 0.0019 Adult retinal GGCTTGCTGG (3) 1.9 0.0019 ONL GGCTTGCTGG (3) 5.7 0.0057 ONL TTTTTTTTTT (433) 3.8 0.0038