Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.270781
Snx11
sorting nexin 11
11
74479
Human Homolog
SNX11[sorting nexin 11]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 40 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TTTTTTTTTT (
2
)
4.9
0.0049
Cb medulloblastoma
CAGCCAAGGT
CCCAGCTCTG (
4
)
GCTGTGCTTT (
2
)
TTTTTTTTTT (
2
)
9.2
0.0092
P8 GC+1d culture
ACGGTGTCCG
CCCAGCTCTG (
4
)
GAAGGAAGAG (
4
)
TTTTTTTTTT (
2
)
18.2
0.0182
P8 GC+SHH+1d culture
CCCAGCTCTG (
4
)
GAAGGAAGAG (
4
)
GCTGTGCTTT (
2
)
TTTTTTTTTT (
2
)
11.8
0.0118
E15 cortex
TTTTTTTTTT (
2
)
4.9
0.0049
P1 cortex
ACGGTGTCCG
TTTTTTTTTT (
2
)
9
0.009
Hypothalamus
CAGCCAAGGT
CCCAGCTCTG (
4
)
TTTTTTTTTT (
2
)
12.6
0.0126
E12.5 retina
GCTGTGCTTT (
2
)
GGCTTGCTGG
TTTTTTTTTT (
2
)
11.3
0.0113
E14.5 retina
TTTTTTTTTT (
2
)
23.7
0.0237
E16.5 retina
GAAGGAAGAG (
4
)
TTTTTTTTTT (
2
)
7.2
0.0072
E18.5 retina
TTTTTTTTTT (
2
)
10.9
0.0109
P0.5 retina
ACGGTGTCCG
TTTTTTTTTT (
2
)
11.8
0.0118
P2.5 retina
TTTTTTTTTT (
2
)
7
0.007
P4.5 retina
TTTTTTTTTT (
2
)
9.9
0.0099
P6.5 retina
GGCTTGCTGG
TTTTTTTTTT (
2
)
13.3
0.0133
P10.5 crx+ retina
TTTTTTTTTT (
2
)
3.8
0.0038
Adult retinal
ACGGTGTCCG
CAGCCAAGGT
CCCAGCTCTG (
4
)
GGCTTGCTGG
TTTTTTTTTT (
2
)
15
0.015
ONL
GGCTTGCTGG
TTTTTTTTTT (
2
)
9.5
0.0095
