Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.271674	Itgb4bp	integrin beta 4 binding protein	2		16418
Gene Ontology	integrin-mediated signaling pathway | intermediate filament | lamin filament | nucleus | protein biosynthesis | translation initiation factor activity | translational initiation
Human Homolog	ITGB4BP[integrin beta 4 binding protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 80 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTGGCTTTCA (6) 22.8 0.0228 P8 Cb GC GGCTCCTTGG (6) 8.2 0.0082 P8 Cb GC CTGGCTTTTC (5) 1.6 0.0016 P8 Cb GC CTGGTGGCAA (3) 1.6 0.0016 P8 Cb GC GGCTCCTGGT (7) 1.6 0.0016 P8 Cb GC TGTGTGGGGA (6) 1.6 0.0016 Cb medulloblastoma CTGGCTTTCA (6) 9.2 0.0092 Cb medulloblastoma GGCTCCTTGG (6) 4.6 0.0046 Cb medulloblastoma AGTACGTCAG (3) 2.3 0.0023 Cb medulloblastoma CTGGCTTTTC (5) 2.3 0.0023 Cb medulloblastoma CTGGTGGCAA (3) 2.3 0.0023 Cb medulloblastoma GGCCTCCCTT (2) 2.3 0.0023 P8 GC+1d culture CTGGCTTTCA (6) 9.1 0.0091 P8 GC+1d culture GGCTCCTTGG (6) 3.4 0.0034 P8 GC+1d culture CTGGTGGCAA (3) 2.3 0.0023 P8 GC+1d culture TGTGTGGGGA (6) 2.3 0.0023 P8 GC+1d culture CTGGCTTTTC (5) 1.1 0.0011 P8 GC+1d culture GGCCTCCCTT (2) 1.1 0.0011 P8 GC+SHH+1d culture CTGGCTTTCA (6) 19.9 0.0199 P8 GC+SHH+1d culture GGCTCCTTGG (6) 3.5 0.0035 P8 GC+SHH+1d culture AGTACGTCAG (3) 1.2 0.0012 P8 GC+SHH+1d culture CTGGCTTTTC (5) 1.2 0.0012 P8 GC+SHH+1d culture CTGGTGGCAA (3) 1.2 0.0012 P8 GC+SHH+1d culture GGCCTCCCTT (2) 1.2 0.0012 P8 GC+SHH+1d culture TGTGTGGGGA (6) 1.2 0.0012 3T3 fibroblasts CTGGCTTTCA (6) 45.6 0.0456 E15 cortex CTGGCTTTCA (6) 19.8 0.0198 E15 cortex GGCTCCTTGG (6) 4.9 0.0049 P1 cortex CTGGCTTTCA (6) 13.6 0.0136 P1 cortex CTGGCTTTTC (5) 4.5 0.0045 P1 cortex GGCTCCTGGT (7) 4.5 0.0045 Hypothalamus AGTACGTCAG (3) 3.6 0.0036 Hypothalamus CTGGCTTTCA (6) 1.8 0.0018 Hypothalamus GGCCTCCCTT (2) 1.8 0.0018 E12.5 retina CTGGCTTTCA (6) 15 0.015 E12.5 retina GGCTCCTTGG (6) 3.8 0.0038 E12.5 retina CTGGTGGCAA (3) 1.9 0.0019 E12.5 retina GGCCTCCCTT (2) 1.9 0.0019 E14.5 retina CTGGCTTTCA (6) 21.9 0.0219 E14.5 retina AGTACGTCAG (3) 1.8 0.0018 E14.5 retina GGCTCCTTGG (6) 1.8 0.0018 E16.5 retina CTGGCTTTCA (6) 19.9 0.0199 E16.5 retina AGTACGTCAG (3) 1.8 0.0018 E16.5 retina GGCCTCCCTT (2) 1.8 0.0018 E18.5 retina CTGGCTTTCA (6) 7.3 0.0073 E18.5 retina CTGGTGGCAA (3) 3.6 0.0036 E18.5 retina GGCTCCTGGT (7) 1.8 0.0018 E18.5 retina GGCTCCTTGG (6) 1.8 0.0018 P0.5 retina CTGGCTTTCA (6) 13.7 0.0137 P0.5 retina GGCCTCCCTT (2) 3.9 0.0039 P0.5 retina CTGGTGGCAA (3) 2 0.002 P0.5 retina GGCTCCTTGG (6) 2 0.002 P2.5 retina CTGGCTTTCA (6) 35.2 0.0352 P2.5 retina GGCCTCCCTT (2) 8.8 0.0088 P2.5 retina GGCTCCTTGG (6) 5.3 0.0053 P2.5 retina CTGGTGGCAA (3) 3.5 0.0035 P2.5 retina GGCTCCTGGT (7) 1.8 0.0018 P4.5 retina CTGGCTTTCA (6) 13.9 0.0139 P4.5 retina GGCCTCCCTT (2) 7.9 0.0079 P4.5 retina GGCTCCTTGG (6) 4 0.004 P4.5 retina GGCTCCTGGT (7) 2 0.002 P6.5 retina CTGGCTTTCA (6) 21.7 0.0217 P6.5 retina GGCCTCCCTT (2) 5 0.005 P6.5 retina GGCTCCTTGG (6) 5 0.005 P6.5 retina AGTACGTCAG (3) 1.7 0.0017 P6.5 retina CTGGCTTTTC (5) 1.7 0.0017 P6.5 retina GGCTCCTGGT (7) 1.7 0.0017 P10.5 crx- retina GCAGAGCTCG (2) 9.3 0.0093 P10.5 crx- retina GGCTCCTTGG (6) 9.3 0.0093 P10.5 crx- retina GGCCTCCCTT (2) 1.9 0.0019 P10.5 crx+ retina GCAGAGCTCG (2) 13.5 0.0135 P10.5 crx+ retina GGCCTCCCTT (2) 5.8 0.0058 P10.5 crx+ retina GGCTCCTTGG (6) 5.8 0.0058 Adult retinal CTGGCTTTCA (6) 11.1 0.0111 Adult retinal AGTACGTCAG (3) 1.9 0.0019 Adult retinal GGCCTCCCTT (2) 1.9 0.0019 Adult retinal GGCTCCTTGG (6) 1.9 0.0019 ONL GGCCTCCCTT (2) 9.6 0.0096 ONL CTGGCTTTCA (6) 1.9 0.0019 ONL GGCTCCTTGG (6) 1.9 0.0019