Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.271674	Itgb4bp	integrin beta 4 binding protein	2		16418
Gene Ontology	integrin-mediated signaling pathway | intermediate filament | lamin filament | nucleus | protein biosynthesis | translation initiation factor activity | translational initiation
Human Homolog	ITGB4BP[integrin beta 4 binding protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 80 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTGGCTTTCA (3) CTGGCTTTTC (3) CTGGTGGCAA GGCTCCTGGT (2) GGCTCCTTGG (2) TGTGTGGGGA (3) 37.4 0.0374 Cb medulloblastoma AGTACGTCAG (2) CTGGCTTTCA (3) CTGGCTTTTC (3) CTGGTGGCAA GGCCTCCCTT GGCTCCTTGG (2) 23 0.023 P8 GC+1d culture CTGGCTTTCA (3) CTGGCTTTTC (3) CTGGTGGCAA GGCCTCCCTT GGCTCCTTGG (2) TGTGTGGGGA (3) 19.3 0.0193 P8 GC+SHH+1d culture AGTACGTCAG (2) CTGGCTTTCA (3) CTGGCTTTTC (3) CTGGTGGCAA GGCCTCCCTT GGCTCCTTGG (2) TGTGTGGGGA (3) 29.4 0.0294 3T3 fibroblasts CTGGCTTTCA (3) 45.6 0.0456 E15 cortex CTGGCTTTCA (3) GGCTCCTTGG (2) 24.7 0.0247 P1 cortex CTGGCTTTCA (3) CTGGCTTTTC (3) GGCTCCTGGT (2) 22.6 0.0226 Hypothalamus AGTACGTCAG (2) CTGGCTTTCA (3) GGCCTCCCTT 7.2 0.0072 E12.5 retina CTGGCTTTCA (3) CTGGTGGCAA GGCCTCCCTT GGCTCCTTGG (2) 22.6 0.0226 E14.5 retina AGTACGTCAG (2) CTGGCTTTCA (3) GGCTCCTTGG (2) 25.5 0.0255 E16.5 retina AGTACGTCAG (2) CTGGCTTTCA (3) GGCCTCCCTT 23.5 0.0235 E18.5 retina CTGGCTTTCA (3) CTGGTGGCAA GGCTCCTGGT (2) GGCTCCTTGG (2) 14.5 0.0145 P0.5 retina CTGGCTTTCA (3) CTGGTGGCAA GGCCTCCCTT GGCTCCTTGG (2) 21.6 0.0216 P2.5 retina CTGGCTTTCA (3) CTGGTGGCAA GGCCTCCCTT GGCTCCTGGT (2) GGCTCCTTGG (2) 54.6 0.0546 P4.5 retina CTGGCTTTCA (3) GGCCTCCCTT GGCTCCTGGT (2) GGCTCCTTGG (2) 27.8 0.0278 P6.5 retina AGTACGTCAG (2) CTGGCTTTCA (3) CTGGCTTTTC (3) GGCCTCCCTT GGCTCCTGGT (2) GGCTCCTTGG (2) 36.8 0.0368 P10.5 crx- retina GCAGAGCTCG GGCCTCCCTT GGCTCCTTGG (2) 20.5 0.0205 P10.5 crx+ retina GCAGAGCTCG GGCCTCCCTT GGCTCCTTGG (2) 25.1 0.0251 Adult retinal AGTACGTCAG (2) CTGGCTTTCA (3) GGCCTCCCTT GGCTCCTTGG (2) 16.8 0.0168 ONL CTGGCTTTCA (3) GGCCTCCCTT GGCTCCTTGG (2) 13.4 0.0134