Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.272809	Ppfia1	protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein, alpha 1	7		233977
Human Homolog	PPFIA1[protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 38 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AACCACGAGT 1.6 0.0016 Cb medulloblastoma GGCTGGTGGG (2) TGCGTATTTA 27.7 0.0277 P8 GC+1d culture GGCTGGTGGG (2) GGGCAGGTGC TGCGTATTTA 5.7 0.0057 P8 GC+SHH+1d culture GGCTGGTGGG (2) GGGCAGGTGC TGCGTATTTA 10.6 0.0106 3T3 fibroblasts GGCTGGTGGG (2) 10.5 0.0105 E15 cortex AACCACGAGT GACAGGAGGA TGCGTATTTA 14.7 0.0147 P1 cortex GGCTGGTGGG (2) 4.5 0.0045 Hypothalamus GGCTGGTGGG (2) 14.5 0.0145 E12.5 retina GGGCAGGTGC 3.8 0.0038 E14.5 retina GGCTGGTGGG (2) TGCGTATTTA 3.6 0.0036 E16.5 retina GGCTGGTGGG (2) TGCGTATTTA 3.6 0.0036 E18.5 retina GGCTGGTGGG (2) 3.6 0.0036 P2.5 retina GACAGGAGGA GGCTGGTGGG (2) GGGCAGGTGC TGCGTATTTA 12.4 0.0124 P4.5 retina GGCTGGTGGG (2) GGGCAGGTGC 4 0.004 P6.5 retina AACCACGAGT GGCTGGTGGG (2) GGGCAGGTGC 5.1 0.0051 P10.5 crx- retina GGCTGGTGGG (2) TGCGTATTTA 11.2 0.0112 P10.5 crx+ retina GGCTGGTGGG (2) 15.4 0.0154 Adult retinal AACCACGAGT GGCTGGTGGG (2) GGGCAGGTGC 5.7 0.0057 ONL GACAGGAGGA GGGCAGGTGC 3.8 0.0038