Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.273217	Polr2b	polymerase (RNA) II (DNA directed) polypeptide B	5		231329
Gene Ontology	DNA binding | DNA-directed RNA polymerase activity | nucleus | transcription | transferase activity
Human Homolog	POLR2B[polymerase (RNA) II (DNA directed) polypeptide B, 140kDa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 49 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTCAGATACT TAGCTTTAAA (2) TCTGTAATCT (2) TGCTTTTTTC (2) 29.3 0.0293 Cb medulloblastoma TAGCTTTAAA (2) TCTGTAATCT (2) TGCTTTTTTC (2) 25.4 0.0254 P8 GC+1d culture AGCCTCTGTA (2) TAGCTTTAAA (2) TCTGTAATCT (2) TGCTTTTTTC (2) 42.1 0.0421 P8 GC+SHH+1d culture GTCAGATACT TAGCTTTAAA (2) TGCTTTTTTC (2) 51.6 0.0516 3T3 fibroblasts TAGCTTTAAA (2) 7 0.007 E15 cortex TGCTTTTTTC (2) 4.9 0.0049 P1 cortex TGCTTTTTTC (2) 9.1 0.0091 Hypothalamus TAGCTTTAAA (2) TGCTTTTTTC (2) 19.9 0.0199 E12.5 retina GTCAGATACT TAGCTTTAAA (2) TGCTTTTTTC (2) 5.7 0.0057 E14.5 retina TAGCTTTAAA (2) TCTGTAATCT (2) TGCTTTTTTC (2) 10.9 0.0109 E16.5 retina TCTGTAATCT (2) TGCTTTTTTC (2) 7.2 0.0072 E18.5 retina TGCTTTTTTC (2) 12.7 0.0127 P0.5 retina TAGCTTTAAA (2) TGCTTTTTTC (2) 13.7 0.0137 P2.5 retina GTCAGATACT TAGCTTTAAA (2) TGCTTTTTTC (2) 12.3 0.0123 P4.5 retina AGCCTCTGTA (2) TAGCTTTAAA (2) TGCTTTTTTC (2) 23.8 0.0238 P6.5 retina TAGCTTTAAA (2) TGCTTTTTTC (2) 26.7 0.0267 P10.5 crx- retina GTCAGATACT TAGCTTTAAA (2) TCTGTAATCT (2) TGCTTTTTTC (2) 18.6 0.0186 P10.5 crx+ retina TAGCTTTAAA (2) TGCTTTTTTC (2) 23.1 0.0231 Adult retinal TAGCTTTAAA (2) TGCTTTTTTC (2) 7.5 0.0075 ONL TAGCTTTAAA (2) TCTGTAATCT (2) TGCTTTTTTC (2) 7.6 0.0076