Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.273502
Cenph
centromere autoantigen H
13
13 51.0 cM
26886
Mm.273502
D13Ertd37e
DNA segment, Chr 13, ERATO Doi 37, expressed
13
13 54.0 cM
52471
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 71 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAAAAAAAAA (
658
)
203.9
0.2039
P8 Cb GC
AAAAAAAAAC (
24
)
4.9
0.0049
P8 Cb GC
AAATCTAAAT
(
4
)
3.3
0.0033
P8 Cb GC
GTGCTGGAGG (
10
)
3.3
0.0033
P8 Cb GC
CATTTTACTT
(
3
)
1.6
0.0016
Cb medulloblastoma
AAAAAAAAAA (
658
)
797.8
0.7978
Cb medulloblastoma
AAAAAAAAAC (
24
)
4.6
0.0046
Cb medulloblastoma
GGAAATGTAA
(
3
)
2.3
0.0023
P8 GC+1d culture
AAAAAAAAAA (
658
)
204.3
0.2043
P8 GC+1d culture
AAAAAAAAAC (
24
)
1.1
0.0011
P8 GC+1d culture
AAATCTAAAT
(
4
)
1.1
0.0011
P8 GC+SHH+1d culture
AAAAAAAAAA (
658
)
278.7
0.2787
P8 GC+SHH+1d culture
AAAAAAAAAC (
24
)
3.5
0.0035
P8 GC+SHH+1d culture
CATTTTACTT
(
3
)
3.5
0.0035
P8 GC+SHH+1d culture
AAATCTAAAT
(
4
)
2.3
0.0023
P8 GC+SHH+1d culture
GTGCTGGAGG (
10
)
2.3
0.0023
3T3 fibroblasts
AAAAAAAAAA (
658
)
28
0.028
3T3 fibroblasts
GTGCTGGAGG (
10
)
3.5
0.0035
E15 cortex
AAAAAAAAAA (
658
)
212.8
0.2128
E15 cortex
AAAAAAAAAC (
24
)
4.9
0.0049
E15 cortex
GTGCTGGAGG (
10
)
4.9
0.0049
P1 cortex
AAAAAAAAAA (
658
)
245.4
0.2454
P1 cortex
AAATCTAAAT
(
4
)
13.6
0.0136
P1 cortex
AAAAAAAAAC (
24
)
9.1
0.0091
Hypothalamus
AAAAAAAAAA (
658
)
123.2
0.1232
Hypothalamus
AAATCTAAAT
(
4
)
5.4
0.0054
Hypothalamus
AAAAAAAAAC (
24
)
1.8
0.0018
Hypothalamus
GTGCTGGAGG (
10
)
1.8
0.0018
E12.5 retina
AAAAAAAAAA (
658
)
138.9
0.1389
E12.5 retina
AAATCTAAAT
(
4
)
5.6
0.0056
E12.5 retina
CATTTTACTT
(
3
)
5.6
0.0056
E12.5 retina
GTGCTGGAGG (
10
)
5.6
0.0056
E14.5 retina
AAAAAAAAAA (
658
)
94.7
0.0947
E14.5 retina
CATTTTACTT
(
3
)
7.3
0.0073
E14.5 retina
GGAAATGTAA
(
3
)
3.6
0.0036
E14.5 retina
GTGCTGGAGG (
10
)
3.6
0.0036
E14.5 retina
AAAAAAAAAC (
24
)
1.8
0.0018
E14.5 retina
AAATCTAAAT
(
4
)
1.8
0.0018
E16.5 retina
AAAAAAAAAA (
658
)
43.5
0.0435
E16.5 retina
CATTTTACTT
(
3
)
9.1
0.0091
E16.5 retina
AAATCTAAAT
(
4
)
3.6
0.0036
E16.5 retina
GTGCTGGAGG (
10
)
3.6
0.0036
E16.5 retina
AAAAAAAAAC (
24
)
1.8
0.0018
E18.5 retina
AAAAAAAAAA (
658
)
374.7
0.3747
E18.5 retina
AAAAAAAAAC (
24
)
3.6
0.0036
E18.5 retina
AAATCTAAAT
(
4
)
3.6
0.0036
E18.5 retina
CATTTTACTT
(
3
)
1.8
0.0018
P0.5 retina
AAAAAAAAAA (
658
)
117.8
0.1178
P0.5 retina
CATTTTACTT
(
3
)
2
0.002
P2.5 retina
AAAAAAAAAA (
658
)
329.1
0.3291
P2.5 retina
AAAAAAAAAC (
24
)
5.3
0.0053
P2.5 retina
GGAAATGTAA
(
3
)
5.3
0.0053
P2.5 retina
CATTTTACTT
(
3
)
3.5
0.0035
P2.5 retina
GTGCTGGAGG (
10
)
3.5
0.0035
P4.5 retina
AAAAAAAAAA (
658
)
283.3
0.2833
P4.5 retina
AAAAAAAAAC (
24
)
2
0.002
P6.5 retina
AAAAAAAAAA (
658
)
266.8
0.2668
P6.5 retina
GTGCTGGAGG (
10
)
13.3
0.0133
P6.5 retina
AAAAAAAAAC (
24
)
5
0.005
P6.5 retina
AAATCTAAAT
(
4
)
3.3
0.0033
P6.5 retina
GGAAATGTAA
(
3
)
1.7
0.0017
P10.5 crx- retina
AAAAAAAAAA (
658
)
44.6
0.0446
P10.5 crx- retina
AAAAAAAAAC (
24
)
1.9
0.0019
P10.5 crx- retina
CATTTTACTT
(
3
)
1.9
0.0019
P10.5 crx+ retina
AAAAAAAAAA (
658
)
96.1
0.0961
P10.5 crx+ retina
GTGCTGGAGG (
10
)
5.8
0.0058
Adult retinal
AAAAAAAAAA (
658
)
57.4
0.0574
Adult retinal
GGAAATGTAA
(
3
)
3.7
0.0037
Adult retinal
GTGCTGGAGG (
10
)
3.7
0.0037
ONL
AAAAAAAAAA (
658
)
103.4
0.1034
ONL
AAATCTAAAT
(
4
)
3.8
0.0038
