Mouse Retina SAGE Library
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Gene: 
Accession: 
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag: 
Cytoband (Mm): 
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene: 
Cytoband (Hs): 
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.27359
1500011K16Rik
RIKEN cDNA 1500011K16 gene
2
2 F1
67885
Human Homolog
LOC205251[hypothetical protein LOC205251]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
Total 4 In Situ Hybridization Images
Images -- Click to Enlarge
SAGE Tags
Total 70 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGAAAAAAAA (
81
)
27.7
0.0277
P8 Cb GC
AAAATAAAAA (
28
)
6.5
0.0065
Cb medulloblastoma
TGAAAAAAAA (
81
)
78.6
0.0786
Cb medulloblastoma
AAAATAAAAA (
28
)
9.2
0.0092
Cb medulloblastoma
CACAAAAGAA (
4
)
2.3
0.0023
Cb medulloblastoma
GCTTGCTTCA
2.3
0.0023
P8 GC+1d culture
TGAAAAAAAA (
81
)
26.3
0.0263
P8 GC+1d culture
AAAATAAAAA (
28
)
8
0.008
P8 GC+1d culture
GCTTGCTTCA
2.3
0.0023
P8 GC+SHH+1d culture
TGAAAAAAAA (
81
)
57.4
0.0574
P8 GC+SHH+1d culture
AAAATAAAAA (
28
)
5.9
0.0059
P8 GC+SHH+1d culture
TGATATAACG
2.3
0.0023
P8 GC+SHH+1d culture
GCTTGCTTCA
1.2
0.0012
3T3 fibroblasts
GCTTGCTTCA
7
0.007
3T3 fibroblasts
TGAAAAAAAA (
81
)
7
0.007
E15 cortex
TGAAAAAAAA (
81
)
29.7
0.0297
E15 cortex
GCTTGCTTCA
4.9
0.0049
P1 cortex
AAAATAAAAA (
28
)
9.1
0.0091
P1 cortex
CACAAAAGAA (
4
)
4.5
0.0045
P1 cortex
TGAAAAAAAA (
81
)
4.5
0.0045
Hypothalamus
TGAAAAAAAA (
81
)
36.2
0.0362
Hypothalamus
TGATATAACG
14.5
0.0145
Hypothalamus
GCTTGCTTCA
5.4
0.0054
Hypothalamus
AAAATAAAAA (
28
)
3.6
0.0036
Hypothalamus
CACAAAAGAA (
4
)
1.8
0.0018
Hypothalamus
TCCTTGCAAG
1.8
0.0018
E12.5 retina
TGAAAAAAAA (
81
)
31.9
0.0319
E12.5 retina
AAAATAAAAA (
28
)
5.6
0.0056
E12.5 retina
GCTTGCTTCA
3.8
0.0038
E14.5 retina
TGAAAAAAAA (
81
)
49.2
0.0492
E14.5 retina
AAAATAAAAA (
28
)
14.6
0.0146
E14.5 retina
GCTTGCTTCA
3.6
0.0036
E16.5 retina
TGAAAAAAAA (
81
)
16.3
0.0163
E16.5 retina
AAAATAAAAA (
28
)
10.9
0.0109
E16.5 retina
GCTTGCTTCA
7.2
0.0072
E18.5 retina
TGAAAAAAAA (
81
)
74.6
0.0746
E18.5 retina
AAAATAAAAA (
28
)
16.4
0.0164
E18.5 retina
GCTTGCTTCA
7.3
0.0073
P0.5 retina
TGAAAAAAAA (
81
)
15.7
0.0157
P0.5 retina
AAAATAAAAA (
28
)
5.9
0.0059
P0.5 retina
GCTTGCTTCA
3.9
0.0039
P2.5 retina
TGAAAAAAAA (
81
)
42.2
0.0422
P2.5 retina
AAAATAAAAA (
28
)
19.4
0.0194
P2.5 retina
GCTTGCTTCA
5.3
0.0053
P2.5 retina
TGATATAACG
1.8
0.0018
P4.5 retina
TGAAAAAAAA (
81
)
43.6
0.0436
P4.5 retina
AAAATAAAAA (
28
)
21.8
0.0218
P4.5 retina
GCTTGCTTCA
7.9
0.0079
P4.5 retina
TGATATAACG
4
0.004
P6.5 retina
TGAAAAAAAA (
81
)
33.3
0.0333
P6.5 retina
AAAATAAAAA (
28
)
11.7
0.0117
P6.5 retina
GCTTGCTTCA
11.7
0.0117
P10.5 crx- retina
GCTTGCTTCA
24.2
0.0242
P10.5 crx- retina
TGAAAAAAAA (
81
)
9.3
0.0093
P10.5 crx- retina
AAAATAAAAA (
28
)
3.7
0.0037
P10.5 crx+ retina
TGAAAAAAAA (
81
)
19.2
0.0192
P10.5 crx+ retina
GCTTGCTTCA
13.5
0.0135
P10.5 crx+ retina
TGATATAACG
3.8
0.0038
P10.5 crx+ retina
AAAATAAAAA (
28
)
1.9
0.0019
Adult retinal
GCTTGCTTCA
13
0.013
Adult retinal
TGAAAAAAAA (
81
)
13
0.013
Adult retinal
TCCTTGCAAG
3.7
0.0037
Adult retinal
TGATATAACG
3.7
0.0037
Adult retinal
AAAATAAAAA (
28
)
1.9
0.0019
Adult retinal
CACAAAAGAA (
4
)
1.9
0.0019
ONL
TGAAAAAAAA (
81
)
19.2
0.0192
ONL
AAAATAAAAA (
28
)
11.5
0.0115
ONL
GCTTGCTTCA
9.6
0.0096
ONL
TGATATAACG
9.6
0.0096
ONL
CACAAAAGAA (
4
)
1.9
0.0019