Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.274484	Nipa1	non imprinted in Prader-Willi/Angelman syndrome 1 homolog (human)	7		233280
Mm.274484	Rps12	ribosomal protein S12	2		20042
Gene Ontology	cytosolic ribosome (sensu Eukarya) | ribonucleoprotein complex | ribosome biogenesis | structural constituent of ribosome
Human Homolog	RPS12[ribosomal protein S12]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 63 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTTTAATCC (355) 52.2 0.0522 P8 Cb GC CACCACCACT (20) 1.6 0.0016 P8 Cb GC GCTGTCCTGG (16) 1.6 0.0016 Cb medulloblastoma CCTTTAATCC (355) 41.6 0.0416 Cb medulloblastoma CTGCTGCTGT (7) 2.3 0.0023 Cb medulloblastoma TACCCCCAAA (2) 2.3 0.0023 P8 GC+1d culture CCTTTAATCC (355) 32 0.032 P8 GC+1d culture CACCACCACT (20) 5.7 0.0057 P8 GC+1d culture CTGCTGCTGT (7) 2.3 0.0023 P8 GC+1d culture GCTGTCCTGG (16) 2.3 0.0023 P8 GC+SHH+1d culture CCTTTAATCC (355) 25.8 0.0258 P8 GC+SHH+1d culture CTGCTGCTGT (7) 2.3 0.0023 P8 GC+SHH+1d culture GCTGTCCTGG (16) 2.3 0.0023 P8 GC+SHH+1d culture CACCACCACT (20) 1.2 0.0012 P8 GC+SHH+1d culture TACCCCCAAA (2) 1.2 0.0012 3T3 fibroblasts CCTTTAATCC (355) 70.1 0.0701 3T3 fibroblasts CTGCTGCTGT (7) 3.5 0.0035 E15 cortex CCTTTAATCC (355) 54.4 0.0544 P1 cortex CCTTTAATCC (355) 154.5 0.1545 P1 cortex CACCACCACT (20) 4.5 0.0045 Hypothalamus CCTTTAATCC (355) 19.9 0.0199 Hypothalamus CACCACCACT (20) 5.4 0.0054 Hypothalamus CTGCTGCTGT (7) 3.6 0.0036 Hypothalamus GCTGTCCTGG (16) 3.6 0.0036 E12.5 retina CCTTTAATCC (355) 75.1 0.0751 E12.5 retina CACCACCACT (20) 5.6 0.0056 E12.5 retina GCTGTCCTGG (16) 3.8 0.0038 E14.5 retina CCTTTAATCC (355) 120.3 0.1203 E14.5 retina CACCACCACT (20) 3.6 0.0036 E14.5 retina CTGCTGCTGT (7) 1.8 0.0018 E16.5 retina CCTTTAATCC (355) 68.8 0.0688 E16.5 retina CTGCTGCTGT (7) 3.6 0.0036 E16.5 retina CACCACCACT (20) 1.8 0.0018 E16.5 retina GCTGTCCTGG (16) 1.8 0.0018 E18.5 retina CCTTTAATCC (355) 23.6 0.0236 E18.5 retina CACCACCACT (20) 5.5 0.0055 E18.5 retina GCTGTCCTGG (16) 5.5 0.0055 P0.5 retina CCTTTAATCC (355) 72.6 0.0726 P0.5 retina CACCACCACT (20) 3.9 0.0039 P0.5 retina GCTGTCCTGG (16) 3.9 0.0039 P0.5 retina CTGCTGCTGT (7) 2 0.002 P2.5 retina CCTTTAATCC (355) 70.4 0.0704 P2.5 retina CACCACCACT (20) 5.3 0.0053 P2.5 retina CTGCTGCTGT (7) 1.8 0.0018 P4.5 retina CCTTTAATCC (355) 43.6 0.0436 P4.5 retina CACCACCACT (20) 4 0.004 P4.5 retina CTGCTGCTGT (7) 2 0.002 P4.5 retina GCTGTCCTGG (16) 2 0.002 P6.5 retina CCTTTAATCC (355) 70 0.07 P6.5 retina CACCACCACT (20) 5 0.005 P10.5 crx- retina CCTTTAATCC (355) 63.2 0.0632 P10.5 crx- retina CTGCTGCTGT (7) 7.4 0.0074 P10.5 crx- retina CACCACCACT (20) 1.9 0.0019 P10.5 crx- retina TACCCCCAAA (2) 1.9 0.0019 P10.5 crx+ retina CCTTTAATCC (355) 38.4 0.0384 P10.5 crx+ retina CACCACCACT (20) 3.8 0.0038 P10.5 crx+ retina CTGCTGCTGT (7) 3.8 0.0038 Adult retinal CCTTTAATCC (355) 129.6 0.1296 Adult retinal CACCACCACT (20) 9.3 0.0093 Adult retinal CTGCTGCTGT (7) 3.7 0.0037 Adult retinal GCTGTCCTGG (16) 1.9 0.0019 ONL CCTTTAATCC (355) 84.3 0.0843 ONL CACCACCACT (20) 3.8 0.0038