Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.27545	Hrmt1l2-rs	heterogeneous nuclear ribonucleoproteins methyltransferase-like 2 (S. cerevisiae), related sequence	18	18 2.0 cM	93844
Mm.27545	Hrmt1l2	heterogeneous nuclear ribonucleoproteins methyltransferase-like 2 (S. cerevisiae)	7	7 23.1 cM	15469
Gene Ontology	methyltransferase activity | nucleus | organogenesis | protein methyltransferase activity | ribonucleoprotein complex | RNA processing | S-adenosylmethionine-dependent methyltransferase activity | transferase activity | viral nucleocapsid
Human Homolog	HRMT1L2[HMT1 hnRNP methyltransferase-like 2 (S. cerevisiae)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 62 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAGAAAAA (3) AGTTGAAGGG (3) GAGGACTACC (2) GGATGAGGCC (2) GTCAGCTGAG (2) TAGAACACAG (2) TTCGCTGCCA (7) 19.5 0.0195 Cb medulloblastoma AAAAGAAAAA (3) GTCAACACCG (2) TTCGCTGCCA (7) 16.2 0.0162 P8 GC+1d culture AAAAGAAAAA (3) GAGGACTACC (2) GTCAACACCG (2) GTCAGCTGAG (2) TTCGCTGCCA (7) 13.6 0.0136 P8 GC+SHH+1d culture AAAAGAAAAA (3) GTCAGCTGAG (2) TTCGCTGCCA (7) 8.2 0.0082 3T3 fibroblasts GTCAACACCG (2) 3.5 0.0035 Hypothalamus AGTTGAAGGG (3) TTCGCTGCCA (7) 7.2 0.0072 E12.5 retina GAGGACTACC (2) GGATGAGGCC (2) GTCAGCTGAG (2) TTCGCTGCCA (7) 15.1 0.0151 E14.5 retina GAGGACTACC (2) GTCAGCTGAG (2) TTCGCTGCCA (7) 7.2 0.0072 E16.5 retina AGTTGAAGGG (3) GTCAGCTGAG (2) TTCGCTGCCA (7) 10.8 0.0108 E18.5 retina AAAAGAAAAA (3) GAGGACTACC (2) GTCAGCTGAG (2) 12.8 0.0128 P0.5 retina GAGGACTACC (2) GTCAACACCG (2) TAGAACACAG (2) TTCGCTGCCA (7) 15.8 0.0158 P2.5 retina AAAAGAAAAA (3) AGTTGAAGGG (3) GAGGACTACC (2) GTCAGCTGAG (2) TTCGCTGCCA (7) 17.7 0.0177 P4.5 retina AAAAGAAAAA (3) GAGGACTACC (2) GTCAGCTGAG (2) TTCGCTGCCA (7) 23.7 0.0237 P6.5 retina GAGGACTACC (2) GTCAGCTGAG (2) TTCGCTGCCA (7) 13.3 0.0133 P10.5 crx- retina AAAAGAAAAA (3) GAGGACTACC (2) TAGAACACAG (2) TTCGCTGCCA (7) 16.8 0.0168 P10.5 crx+ retina AAAAGAAAAA (3) GAGGACTACC (2) GTCAACACCG (2) GTCAGCTGAG (2) TTCGCTGCCA (7) 13.3 0.0133 Adult retinal AAAAGAAAAA (3) GTCAGCTGAG (2) 5.6 0.0056 ONL AAAAGAAAAA (3) 5.7 0.0057