Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.275555	Cnn3	calponin 3, acidic	3		71994
Gene Ontology	actin binding | calmodulin binding | smooth muscle contraction
Human Homolog	CNN3[calponin 3, acidic]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 83 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATCAGTGTGC CAGGTTTGGG (3) GAAAGGGCGG 32.6 0.0326 Cb medulloblastoma ATCAGTGAAA ATCAGTGTGA ATCAGTGTGC GAAAGGGCGG 18.4 0.0184 P8 GC+1d culture ATCAGTGTGA ATCAGTGTGC CAGGTTTGGG (3) GAAAGGGCGG TAATCAGAAA (2) 39.8 0.0398 P8 GC+SHH+1d culture ATCAGTGTGA ATCAGTGTGC CAGGTTTGGG (3) GAAAGGGCGG GCGAGTACCC TAATCAGAAA (2) 58.5 0.0585 3T3 fibroblasts CAGGTTTGGG (3) 21 0.021 E15 cortex ATCAGTGTGC CAGGTTTGGG (3) GAAAGGGCGG TAATCAGAAA (2) 34.5 0.0345 P1 cortex CAGGTTTGGG (3) TAATCAGAAA (2) 9 0.009 Hypothalamus ATCAGTGTGA ATCAGTGTGC GAAAGGGCGG 5.4 0.0054 E12.5 retina ATCAGTGAAA ATCAGTGTGC CAGGTTTGGG (3) 54.4 0.0544 E14.5 retina ATCAGTGTGA ATCAGTGTGC CAGGTTTGGG (3) GAAAGGGCGG GCGAGTACCC TGTACTCATT 54.6 0.0546 E16.5 retina ATCAGTGAAA ATCAGTGTGA ATCAGTGTGC CAGGTTTGGG (3) GAAAGGGCGG GCGAGTACCC GGCACAACTT TGTACTCATT 61.5 0.0615 E18.5 retina ATCAGTGAAA ATCAGTGTGA ATCAGTGTGC CAGGTTTGGG (3) TAATCAGAAA (2) 65.4 0.0654 P0.5 retina ATCAGTGAAA ATCAGTGTGA ATCAGTGTGC CAGGTTTGGG (3) GAAAGGGCGG GGCACAACTT 58.9 0.0589 P2.5 retina ATCAGTGTGA ATCAGTGTGC CAGGTTTGGG (3) TAATCAGAAA (2) 33.5 0.0335 P4.5 retina ATCAGTGTGA ATCAGTGTGC CAGGTTTGGG (3) TAATCAGAAA (2) TGTACTCATT 31.7 0.0317 P6.5 retina ATCAGTGAAA ATCAGTGTGA ATCAGTGTGC CAGGTTTGGG (3) GAAAGGGCGG 15 0.015 P10.5 crx- retina ATCAGTGTGC CAGGTTTGGG (3) TAATCAGAAA (2) 11.2 0.0112 P10.5 crx+ retina ATCAGTGAAA ATCAGTGTGA ATCAGTGTGC CAGGTTTGGG (3) GAAAGGGCGG GGCACAACTT TAATCAGAAA (2) 38.3 0.0383 Adult retinal ATCAGTGTGC CAGGTTTGGG (3) GGCACAACTT 11.2 0.0112