Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.276000	Nfatc3	nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	8	8 51.0 cM	18021
Gene Ontology	cellular respiration | cytoplasm | DNA binding | heart development | nucleus | regulation of transcription, DNA-dependent | transcription factor activity
Human Homolog	NFATC3[nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 44 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTAAAAAAAA (80) 13.1 0.0131 Cb medulloblastoma TTAAAAAAAA (80) 53.2 0.0532 P8 GC+1d culture TTAAAAAAAA (80) 28.5 0.0285 P8 GC+1d culture GGCTCAAGAT (3) 3.4 0.0034 P8 GC+SHH+1d culture TTAAAAAAAA (80) 34 0.034 3T3 fibroblasts GGCTCAAGAT (3) 3.5 0.0035 E15 cortex TTAAAAAAAA (80) 4.9 0.0049 P1 cortex TTAAAAAAAA (80) 13.6 0.0136 P1 cortex AGTGCAGGTG (3) 4.5 0.0045 P1 cortex CCCCCAATTT (2) 4.5 0.0045 Hypothalamus TTAAAAAAAA (80) 19.9 0.0199 Hypothalamus AGTGCAGGTG (3) 1.8 0.0018 Hypothalamus CCCCCAATTT (2) 1.8 0.0018 E12.5 retina TTAAAAAAAA (80) 11.3 0.0113 E12.5 retina GGCTCAAGAT (3) 5.6 0.0056 E14.5 retina TTAAAAAAAA (80) 16.4 0.0164 E14.5 retina CATCCTGAAA (3) 1.8 0.0018 E16.5 retina TTAAAAAAAA (80) 16.3 0.0163 E18.5 retina TTAAAAAAAA (80) 50.9 0.0509 P0.5 retina TTAAAAAAAA (80) 17.7 0.0177 P0.5 retina CCCCCAATTT (2) 2 0.002 P0.5 retina TAAGAGTCAT 2 0.002 P2.5 retina TTAAAAAAAA (80) 40.5 0.0405 P2.5 retina CATCCTGAAA (3) 1.8 0.0018 P2.5 retina CCCCCAATTT (2) 1.8 0.0018 P2.5 retina GGCTCAAGAT (3) 1.8 0.0018 P2.5 retina TAAGAGTCAT 1.8 0.0018 P4.5 retina TTAAAAAAAA (80) 47.6 0.0476 P4.5 retina GGCTCAAGAT (3) 4 0.004 P4.5 retina CATCCTGAAA (3) 2 0.002 P6.5 retina TTAAAAAAAA (80) 16.7 0.0167 P6.5 retina CCCCCAATTT (2) 3.3 0.0033 P6.5 retina AGTGCAGGTG (3) 1.7 0.0017 P10.5 crx- retina TTAAAAAAAA (80) 13 0.013 P10.5 crx- retina CCCCCAATTT (2) 1.9 0.0019 P10.5 crx+ retina TTAAAAAAAA (80) 5.8 0.0058 P10.5 crx+ retina CATCCTGAAA (3) 3.8 0.0038 P10.5 crx+ retina CCCCCAATTT (2) 3.8 0.0038 P10.5 crx+ retina GGCTCAAGAT (3) 1.9 0.0019 Adult retinal CCCCCAATTT (2) 7.4 0.0074 Adult retinal TTAAAAAAAA (80) 7.4 0.0074 Adult retinal TAAGAGTCAT 1.9 0.0019 ONL TTAAAAAAAA (80) 7.7 0.0077 ONL GGCTCAAGAT (3) 1.9 0.0019