Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.276000	Nfatc3	nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	8	8 51.0 cM	18021
Gene Ontology	cellular respiration | cytoplasm | DNA binding | heart development | nucleus | regulation of transcription, DNA-dependent | transcription factor activity
Human Homolog	NFATC3[nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 44 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTAAAAAAAA (2) 13.1 0.0131 Cb medulloblastoma TTAAAAAAAA (2) 53.2 0.0532 P8 GC+1d culture GGCTCAAGAT (2) TTAAAAAAAA (2) 31.9 0.0319 P8 GC+SHH+1d culture TTAAAAAAAA (2) 34 0.034 3T3 fibroblasts GGCTCAAGAT (2) 3.5 0.0035 E15 cortex TTAAAAAAAA (2) 4.9 0.0049 P1 cortex AGTGCAGGTG (2) CCCCCAATTT TTAAAAAAAA (2) 22.6 0.0226 Hypothalamus AGTGCAGGTG (2) CCCCCAATTT TTAAAAAAAA (2) 23.5 0.0235 E12.5 retina GGCTCAAGAT (2) TTAAAAAAAA (2) 16.9 0.0169 E14.5 retina CATCCTGAAA TTAAAAAAAA (2) 18.2 0.0182 E16.5 retina TTAAAAAAAA (2) 16.3 0.0163 E18.5 retina TTAAAAAAAA (2) 50.9 0.0509 P0.5 retina CCCCCAATTT TAAGAGTCAT TTAAAAAAAA (2) 21.7 0.0217 P2.5 retina CATCCTGAAA CCCCCAATTT GGCTCAAGAT (2) TAAGAGTCAT TTAAAAAAAA (2) 47.7 0.0477 P4.5 retina CATCCTGAAA GGCTCAAGAT (2) TTAAAAAAAA (2) 53.6 0.0536 P6.5 retina AGTGCAGGTG (2) CCCCCAATTT TTAAAAAAAA (2) 21.7 0.0217 P10.5 crx- retina CCCCCAATTT TTAAAAAAAA (2) 14.9 0.0149 P10.5 crx+ retina CATCCTGAAA CCCCCAATTT GGCTCAAGAT (2) TTAAAAAAAA (2) 15.3 0.0153 Adult retinal CCCCCAATTT TAAGAGTCAT TTAAAAAAAA (2) 16.7 0.0167 ONL GGCTCAAGAT (2) TTAAAAAAAA (2) 9.6 0.0096