Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.276305	Dhx30	DEAH (Asp-Glu-Ala-His) box polypeptide 30	9		72831
Gene Ontology	ATP binding | helicase activity | hydrolase activity
Human Homolog	DHX30[DEAH (Asp-Glu-Ala-His) box polypeptide 30]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 86 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGTGTCAACC (3) 26.1 0.0261 P8 Cb GC GTGGCACACA (30) 6.5 0.0065 P8 Cb GC ACAGTGGCAG (4) 1.6 0.0016 P8 Cb GC CAAAAGAAAA (8) 1.6 0.0016 P8 Cb GC TGTCAGATGA (3) 1.6 0.0016 Cb medulloblastoma TGTGTCAACC (3) 141.1 0.1411 Cb medulloblastoma GTGGCACACA (30) 11.6 0.0116 Cb medulloblastoma TGTCAGATGA (3) 4.6 0.0046 Cb medulloblastoma ACAGTGGCAG (4) 2.3 0.0023 P8 GC+1d culture TGTGTCAACC (3) 27.4 0.0274 P8 GC+1d culture GTGGCACACA (30) 13.7 0.0137 P8 GC+1d culture TGTCAGATGA (3) 6.8 0.0068 P8 GC+1d culture GGCAGCTGCT (4) 3.4 0.0034 P8 GC+1d culture GCCGTCAAGT 2.3 0.0023 P8 GC+1d culture ACAGTGGCAG (4) 1.1 0.0011 P8 GC+1d culture CAAAAGAAAA (8) 1.1 0.0011 P8 GC+SHH+1d culture TGTGTCAACC (3) 32.8 0.0328 P8 GC+SHH+1d culture TGTCAGATGA (3) 9.4 0.0094 P8 GC+SHH+1d culture GGCAGCTGCT (4) 4.7 0.0047 P8 GC+SHH+1d culture CAAAAGAAAA (8) 2.3 0.0023 P8 GC+SHH+1d culture GCCGTCAAGT 2.3 0.0023 P8 GC+SHH+1d culture GTGGCACACA (30) 2.3 0.0023 3T3 fibroblasts TGTGTCAACC (3) 17.5 0.0175 3T3 fibroblasts GTGGCACACA (30) 14 0.014 3T3 fibroblasts GGCTTTTGAG (3) 7 0.007 E15 cortex GTGGCACACA (30) 24.7 0.0247 E15 cortex TGTGTCAACC (3) 14.8 0.0148 E15 cortex GGCAGCTGCT (4) 4.9 0.0049 P1 cortex TGTGTCAACC (3) 27.3 0.0273 P1 cortex TGTCAGATGA (3) 9.1 0.0091 P1 cortex CAAAAGAAAA (8) 4.5 0.0045 P1 cortex GTGGCACACA (30) 4.5 0.0045 Hypothalamus TGTGTCAACC (3) 63.4 0.0634 Hypothalamus GTGGCACACA (30) 7.2 0.0072 Hypothalamus TGTCAGATGA (3) 7.2 0.0072 Hypothalamus GGCAGCTGCT (4) 1.8 0.0018 E12.5 retina TGTGTCAACC (3) 22.5 0.0225 E12.5 retina GTGGCACACA (30) 11.3 0.0113 E12.5 retina TGTCAGATGA (3) 9.4 0.0094 E12.5 retina AAATATGTAA (5) 3.8 0.0038 E12.5 retina CAGCAGCTGC (4) 1.9 0.0019 E14.5 retina GTGGCACACA (30) 18.2 0.0182 E14.5 retina TGTGTCAACC (3) 12.8 0.0128 E14.5 retina CAGCAGCTGC (4) 1.8 0.0018 E14.5 retina GCCGTCAAGT 1.8 0.0018 E14.5 retina TGTCAGATGA (3) 1.8 0.0018 E16.5 retina TGTGTCAACC (3) 16.3 0.0163 E16.5 retina GTGGCACACA (30) 9.1 0.0091 E16.5 retina GCCGTCAAGT 3.6 0.0036 E16.5 retina AAATATGTAA (5) 1.8 0.0018 E18.5 retina TGTGTCAACC (3) 14.6 0.0146 E18.5 retina GTGGCACACA (30) 5.5 0.0055 P0.5 retina TGTGTCAACC (3) 27.5 0.0275 P0.5 retina GTGGCACACA (30) 11.8 0.0118 P0.5 retina GCCGTCAAGT 5.9 0.0059 P0.5 retina TGTCAGATGA (3) 5.9 0.0059 P2.5 retina TGTGTCAACC (3) 22.9 0.0229 P2.5 retina GTGGCACACA (30) 17.6 0.0176 P2.5 retina TGTCAGATGA (3) 7 0.007 P2.5 retina AAATATGTAA (5) 1.8 0.0018 P4.5 retina TGTGTCAACC (3) 27.7 0.0277 P4.5 retina TGTCAGATGA (3) 13.9 0.0139 P4.5 retina GTGGCACACA (30) 11.9 0.0119 P4.5 retina ACAGTGGCAG (4) 2 0.002 P6.5 retina GTGGCACACA (30) 26.7 0.0267 P6.5 retina TGTGTCAACC (3) 23.3 0.0233 P6.5 retina TGTCAGATGA (3) 5 0.005 P6.5 retina AAATATGTAA (5) 3.3 0.0033 P6.5 retina CAGCAGCTGC (4) 1.7 0.0017 P6.5 retina GGCTTTTGAG (3) 1.7 0.0017 P10.5 crx- retina TGTGTCAACC (3) 65 0.065 P10.5 crx- retina GTGGCACACA (30) 13 0.013 P10.5 crx- retina TGTCAGATGA (3) 5.6 0.0056 P10.5 crx+ retina TGTGTCAACC (3) 36.5 0.0365 P10.5 crx+ retina GTGGCACACA (30) 7.7 0.0077 P10.5 crx+ retina TGTCAGATGA (3) 3.8 0.0038 P10.5 crx+ retina GCCGTCAAGT 1.9 0.0019 Adult retinal TGTGTCAACC (3) 25.9 0.0259 Adult retinal GTGGCACACA (30) 5.6 0.0056 Adult retinal TGTCAGATGA (3) 5.6 0.0056 Adult retinal GCCGTCAAGT 3.7 0.0037 Adult retinal GGCTTTTGAG (3) 1.9 0.0019 ONL GTGGCACACA (30) 24.9 0.0249 ONL TGTCAGATGA (3) 9.6 0.0096 ONL TGTGTCAACC (3) 7.7 0.0077 ONL GCCGTCAAGT 3.8 0.0038