Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.277327	H13	histocompatibility 13	2	2 86.0 cM	14950
Gene Ontology	D-alanyl-D-alanine endopeptidase activity | endoplasmic reticulum | endoplasmic reticulum membrane | hydrolase activity | integral to membrane | peptidase activity
Human Homolog	HM13[histocompatibility (minor) 13]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 62 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGACAATAC GCCGCTAGGC (2) 22.9 0.0229 Cb medulloblastoma GCCGCTAGGC (2) GCCGTTAGGC GGATGAGTTT 20.8 0.0208 P8 GC+1d culture AAGACAATAC AAGACATATA (2) GCCGCTAGGC (2) GCCGTTAGGC GGATGAGTTT TGGCCAGCAT 38.7 0.0387 P8 GC+SHH+1d culture AAGACAATAC AAGACATATA (2) AGTCATTTTG GCCGCTAGGC (2) GCCGTTAGGC TGGCCAGCAT 27 0.027 3T3 fibroblasts GCCGCTAGGC (2) GCGCTGCTGC 35 0.035 E15 cortex GCCGCTAGGC (2) TGGCCAGCAT 34.6 0.0346 P1 cortex AGTCATTTTG GCCGCTAGGC (2) 13.6 0.0136 Hypothalamus AAGACAATAC AAGACATATA (2) GCCGCTAGGC (2) 12.6 0.0126 E12.5 retina AAGACAATAC GCCGCTAGGC (2) TGGCCAGCAT 11.3 0.0113 E14.5 retina AAGACAATAC GCCGCTAGGC (2) 25.5 0.0255 E16.5 retina AAGACAATAC CTGGGTAAAA GCCGCTAGGC (2) GGATGAGTTT 32.6 0.0326 E18.5 retina AAGACAATAC CTGGGTAAAA GCCGCTAGGC (2) 32.7 0.0327 P0.5 retina AAGACAATAC GCCGCTAGGC (2) 19.6 0.0196 P2.5 retina AAGACAATAC AAGACATATA (2) AGTCATTTTG GCCGCTAGGC (2) 24.7 0.0247 P4.5 retina AAGACATATA (2) GCCGCTAGGC (2) 27.8 0.0278 P6.5 retina AAGACAATAC AAGACATATA (2) CTGGGTAAAA GCCGCTAGGC (2) GCGCTGCTGC 36.7 0.0367 P10.5 crx- retina AAGACAATAC AAGACATATA (2) GCCGCTAGGC (2) 24.2 0.0242 P10.5 crx+ retina AAGACAATAC GCCGCTAGGC (2) TGGCCAGCAT 36.5 0.0365 Adult retinal GCCGCTAGGC (2) GCGCTGCTGC GGATGAGTTT 18.6 0.0186 ONL AAGACAATAC GCCGCTAGGC (2) 7.6 0.0076