Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.277498	Psap	prosaposin	10	10 35.0 cM	19156
Gene Ontology	extracellular space | lipid metabolism | lysosome | mitochondrion | sphingolipid metabolism
Human Homolog	PSAP[prosaposin (variant Gaucher disease and variant metachromatic leukodystrophy)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 99 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AACTGAGGGG 9.8 0.0098 P8 Cb GC AGGGAGCTAC 4.9 0.0049 P8 Cb GC TAAGAGGTGC (2) 4.9 0.0049 P8 Cb GC ACCTCCAGCC (2) 1.6 0.0016 P8 Cb GC CAGGATCAGC 1.6 0.0016 P8 Cb GC CGCACTGCTC 1.6 0.0016 P8 Cb GC TGCCTCCTCA 1.6 0.0016 P8 Cb GC TGCTCCTCAG (2) 1.6 0.0016 Cb medulloblastoma AACTGAGGGG 67.1 0.0671 Cb medulloblastoma TAAGAGGTGC (2) 43.9 0.0439 Cb medulloblastoma AGGGAGCTAC 11.6 0.0116 Cb medulloblastoma CAGGATCAGC 4.6 0.0046 Cb medulloblastoma TGTGGAACTA (2) 4.6 0.0046 Cb medulloblastoma AGGTGAACAG 2.3 0.0023 Cb medulloblastoma TGCTCCTCAG (2) 2.3 0.0023 P8 GC+1d culture AACTGAGGGG 79.9 0.0799 P8 GC+1d culture TAAGAGGTGC (2) 25.1 0.0251 P8 GC+1d culture AGGTGAACAG 5.7 0.0057 P8 GC+1d culture ACTCCAGCCT (2) 2.3 0.0023 P8 GC+1d culture CTCTGGGGGC (2) 2.3 0.0023 P8 GC+1d culture TGTGGAACTA (2) 1.1 0.0011 P8 GC+SHH+1d culture AACTGAGGGG 44.5 0.0445 P8 GC+SHH+1d culture TAAGAGGTGC (2) 10.5 0.0105 P8 GC+SHH+1d culture AGGTGAACAG 3.5 0.0035 P8 GC+SHH+1d culture TGCTCCTCAG (2) 2.3 0.0023 P8 GC+SHH+1d culture AGGGAGCTAC 1.2 0.0012 P8 GC+SHH+1d culture TGTGGAACTA (2) 1.2 0.0012 3T3 fibroblasts AACTGAGGGG 59.6 0.0596 3T3 fibroblasts CTCTGGGGGC (2) 3.5 0.0035 3T3 fibroblasts TGCTCCTCAG (2) 3.5 0.0035 E15 cortex AACTGAGGGG 4.9 0.0049 E15 cortex ACCTCCAGCC (2) 4.9 0.0049 E15 cortex ACTCCAGCCT (2) 4.9 0.0049 E15 cortex GTAGGAGATG 4.9 0.0049 P1 cortex AACTGAGGGG 13.6 0.0136 P1 cortex TAAGAGGTGC (2) 4.5 0.0045 Hypothalamus AACTGAGGGG 41.7 0.0417 Hypothalamus TAAGAGGTGC (2) 10.9 0.0109 Hypothalamus AGGGAGCTAC 7.2 0.0072 Hypothalamus AGGTGAACAG 7.2 0.0072 Hypothalamus TGCTCCTCAG (2) 5.4 0.0054 Hypothalamus CGCACTGCTC 3.6 0.0036 Hypothalamus TGCCTCCTCA 3.6 0.0036 Hypothalamus ACCTCCAGCC (2) 1.8 0.0018 Hypothalamus GCCCACTGCC 1.8 0.0018 E12.5 retina AACTGAGGGG 22.5 0.0225 E12.5 retina ACTCCAGCCT (2) 3.8 0.0038 E12.5 retina GTAGGAGATG 1.9 0.0019 E12.5 retina TAAGAGGTGC (2) 1.9 0.0019 E14.5 retina AACTGAGGGG 27.3 0.0273 E14.5 retina AGGGAGCTAC 3.6 0.0036 E14.5 retina AGGTGAACAG 3.6 0.0036 E14.5 retina ACCTCCAGCC (2) 1.8 0.0018 E14.5 retina GCCCACTGCC 1.8 0.0018 E14.5 retina GTAGGAGATG 1.8 0.0018 E14.5 retina TGCTCCTCAG (2) 1.8 0.0018 E16.5 retina AACTGAGGGG 18.1 0.0181 E16.5 retina AGGTGAACAG 5.4 0.0054 E16.5 retina ACTCCAGCCT (2) 3.6 0.0036 E16.5 retina TAAGAGGTGC (2) 3.6 0.0036 E16.5 retina TGCTCCTCAG (2) 3.6 0.0036 E18.5 retina AACTGAGGGG 12.7 0.0127 E18.5 retina TAAGAGGTGC (2) 3.6 0.0036 E18.5 retina AGGTGAACAG 1.8 0.0018 P0.5 retina AACTGAGGGG 27.5 0.0275 P0.5 retina TAAGAGGTGC (2) 5.9 0.0059 P0.5 retina ACCTCCAGCC (2) 2 0.002 P2.5 retina AACTGAGGGG 14.1 0.0141 P2.5 retina TAAGAGGTGC (2) 3.5 0.0035 P2.5 retina AGGTGAACAG 1.8 0.0018 P2.5 retina CCTCTCCTGC 1.8 0.0018 P2.5 retina GTAGGAGATG 1.8 0.0018 P4.5 retina AACTGAGGGG 25.8 0.0258 P4.5 retina TAAGAGGTGC (2) 5.9 0.0059 P4.5 retina ACTCCAGCCT (2) 2 0.002 P6.5 retina AACTGAGGGG 28.3 0.0283 P6.5 retina TAAGAGGTGC (2) 6.7 0.0067 P6.5 retina ACCTCCAGCC (2) 3.3 0.0033 P6.5 retina AGGTGAACAG 3.3 0.0033 P6.5 retina GTAGGAGATG 3.3 0.0033 P6.5 retina AGGGAGCTAC 1.7 0.0017 P6.5 retina CCTCTCCTGC 1.7 0.0017 P10.5 crx- retina AACTGAGGGG 48.3 0.0483 P10.5 crx- retina GCCCACTGCC 3.7 0.0037 P10.5 crx- retina AGGTGAACAG 1.9 0.0019 P10.5 crx- retina TAAGAGGTGC (2) 1.9 0.0019 P10.5 crx+ retina AACTGAGGGG 38.4 0.0384 P10.5 crx+ retina TAAGAGGTGC (2) 3.8 0.0038 P10.5 crx+ retina ACTCCAGCCT (2) 1.9 0.0019 P10.5 crx+ retina CCTCTCCTGC 1.9 0.0019 Adult retinal AACTGAGGGG 38.9 0.0389 Adult retinal TAAGAGGTGC (2) 7.4 0.0074 Adult retinal ACCTCCAGCC (2) 1.9 0.0019 Adult retinal AGGGAGCTAC 1.9 0.0019 Adult retinal CCTCTCCTGC 1.9 0.0019 Adult retinal GTAGGAGATG 1.9 0.0019 Adult retinal TGCCTCCTCA 1.9 0.0019 ONL AACTGAGGGG 21.1 0.0211 ONL ACCTCCAGCC (2) 3.8 0.0038