Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.277498	Psap	prosaposin	10	10 35.0 cM	19156
Gene Ontology	extracellular space | lipid metabolism | lysosome | mitochondrion | sphingolipid metabolism
Human Homolog	PSAP[prosaposin (variant Gaucher disease and variant metachromatic leukodystrophy)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 310 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AACTGAGGGG AAGGAGTACC AATTAAGGGG (2) ACCTCCAGCC (2) AGGGAGCTAC CACGGCTTTC CAGGATCAGC CGCACTGCTC GAGAAATCCT GCCTCGGGGG GCTTCTGGGG (3) GTGGGGAAAA (2) TAAACTTTGG (2) TAAGAGGTGC (2) TCCAAAATTC TGCCTCCTCA TGCTCCTCAG (2) TTCGCTGCCA (7) TTGATGCCAT TTGGTGGGAC (2) 175.9 0.1759 Cb medulloblastoma AAAACACACA (3) AACTGAGGGG AAGGAGTACC AGGGAGCTAC AGGTGAACAG CACCCCAGGA CAGGATCAGC CTCCTCTCCC GTGCTGCCTG GTGGGGAAAA (2) TAAACTTTGG (2) TAAGAGGTGC (2) TCAAGCAAAA TGCTCCTCAG (2) TGTGGAACTA (2) TTCGCTGCCA (7) TTGATGCCAT TTGGTGGGAC (2) 182.5 0.1825 P8 GC+1d culture AACTGAGGGG AAGGAGTACC AATTAAGGGG (2) ACTCCAGCCT (2) ACTTCAGCCT (2) AGGTGAACAG AGGTGAACCA (2) CAACACAAAT CACCCCAGGA CACGGCTTTC CCACCCTAGG CTCTGGGGGC (2) GCCTCGGGGG TAAACTTTGG (2) TAAAGAAGTG (6) TAAGAGGTGC (2) TACTGCACGT TGTGGAACTA (2) TTCGCTGCCA (7) TTGATGCCAT 253.2 0.2532 P8 GC+SHH+1d culture AACTGAGGGG AAGGAGTACC AATTAAGGGG (2) ACTCCAGCCG AGGGAGCTAC AGGTGAACAG AGTAACCCAC (2) CAACACAAAT CACGGCTTTC CTCCTCTCCC GCCTCGGGGG TAAACTTTGG (2) TAAGAGGTGC (2) TCCAAAATTC TGCTCCTCAG (2) TGTGGAACTA (2) TTCGCTGCCA (7) TTGATGCCAT 247 0.247 3T3 fibroblasts AACTGAGGGG AAGGAGTACC AGGTGAACCA (2) CACGGCTTTC CCCGCTGGGA CTCCTCTCCC CTCTGGGGGC (2) GCCTCGGGGG TGCTCCTCAG (2) TTGATGCCAT TTGGTGGGAC (2) 227.8 0.2278 E15 cortex AACTGAGGGG ACCTCCAGCC (2) ACTCCAGCCT (2) ACTCCAGCTG (3) GCCTCGGGGG GCTTCTGGGG (3) GTAGGAGATG TAAACTTTGG (2) TCCAAAATTC TTGATGCCAT 78.8 0.0788 P1 cortex AACTGAGGGG AGGTGAACCA (2) CAACACAAAT CCCGCTGGGA GAGACTCCTG GAGACTGTCT GTGCTGCCTG TAAACTTTGG (2) TAAGAGGTGC (2) 54.2 0.0542 Hypothalamus AACTGAGGGG AAGGAGTACC ACCTCCAGCC (2) AGGGAGCTAC AGGTGAACAG CACCCCAGGA CCACCCTAGG CGCACTGCTC CTCCTCTCCC GAGACTCCTG GCCCACTGCC GCCTCGGGGG TAAAGAAGTG (6) TAAGAGGTGC (2) TGATTTTATG TGCCTCCTCA TGCTCCTCAG (2) TTCGCTGCCA (7) TTGATGCCAT TTGGTGGGAC (2) 142.7 0.1427 E12.5 retina AACTGAGGGG AAGGAGTACC ACTCCAGCCT (2) AGTAACCCAC (2) CCACCCTAGG GAGACTGTCT GCCTCGGGGG GTAGGAGATG TAAACTTTGG (2) TAAGAGGTGC (2) TACTGCACGT TTCGCTGCCA (7) TTGATGCCAT 75.3 0.0753 E14.5 retina AACTGAGGGG AAGGAGTACC AATTAAGGGG (2) ACCTCCAGCC (2) AGGGAGCTAC AGGTGAACAG AGGTGAACCA (2) AGTAACCCAC (2) CAACACAAAT GCCCACTGCC GCCTCGGGGG GTAGGAGATG GTGGGGAAAA (2) TAAACTTTGG (2) TGCTCCTCAG (2) TTCGCTGCCA (7) TTGATGCCAT TTGGTGGGAC (2) 94.3 0.0943 E16.5 retina AAAACACACA (3) AACTGAGGGG AAGGAGTACC AATTAAGGGG (2) ACTCCAGCCG ACTCCAGCCT (2) AGGTGAACAG AGTAACCCAC (2) CACCCCAGGA CCACCCTAGG CTCCTCTCCC GAGACTGTCT GCCTCGGGGG TAAACTTTGG (2) TAAGAGGTGC (2) TACTGCACGT TCCAAAATTC TGCTCCTCAG (2) TTCGCTGCCA (7) TTGATGCCAT 108.4 0.1084 E18.5 retina AAAACTGTGT (3) AACTGAGGGG AGGTGAACAG AGTAACCCAC (2) GAGAAATCCT GAGACTGTCT GCCTCGGGGG GTCTGGAGTA TAAACTTTGG (2) TAAGAGGTGC (2) TACTGCACGT TGATTTTATG TTGATGCCAT 72.5 0.0725 P0.5 retina AACTGAGGGG AAGGAGTACC ACCTCCAGCC (2) ACTTCAGCCT (2) AGTAACCCAC (2) GCCTCGGGGG GTCTGGAGTA TAAACTTTGG (2) TAAGAGGTGC (2) TTCGCTGCCA (7) TTGATGCCAT 78.6 0.0786 P2.5 retina AAAACTGTGT (3) AACTGAGGGG AAGGAGTACC AATTAAGGGG (2) AGGTGAACAG AGGTGAACCA (2) AGTAACCCAC (2) CAACACAAAT CACCCCAGGA CCTCTCCTGC GAGAAATCCT GCCTCGGGGG GTAGGAGATG GTGCCCCCCC GTGCTGCCTG GTGGGGAAAA (2) TAAACTTTGG (2) TAAAGAAGTG (6) TAAGAGGTGC (2) TGATTTTATG TTCGCTGCCA (7) TTGATGCCAT TTGGTGGGAC (2) 127.1 0.1271 P4.5 retina AAAACTGTGT (3) AACTGAGGGG ACTCCAGCCT (2) AGTAACCCAC (2) CAACACAAAT CTCCTCTCCC GCCTCGGGGG GTGCCCCCCC TAAACTTTGG (2) TAAGAGGTGC (2) TTCGCTGCCA (7) TTGATGCCAT 91.3 0.0913 P6.5 retina AACTGAGGGG AAGGAGTACC AATTAAGGGG (2) ACCTCCAGCC (2) AGGGAGCTAC AGGTGAACAG CAACACAAAT CCTCTCCTGC GAGACTCCTG GCCTCGGGGG GCTTCTGGGG (3) GTAGGAGATG GTGCCCCCCC GTGCTGCCTG GTGGGGAAAA (2) TAAACTTTGG (2) TAAGAGGTGC (2) TACTGCACGT TTCGCTGCCA (7) TTGATGCCAT 105.2 0.1052 P10.5 crx- retina AACTGAGGGG AAGGAGTACC AATTAAGGGG (2) AGGTGAACAG CAACACAAAT CACCCCAGGA CCCGCTGGGA GCCCACTGCC GCCTCGGGGG GTGCTGCCTG GTGGGGAAAA (2) TAAACTTTGG (2) TAAGAGGTGC (2) TTCGCTGCCA (7) TTGATGCCAT 82.2 0.0822 P10.5 crx+ retina AACTGAGGGG ACTCCAGCCT (2) CAACACAAAT CCACCCTAGG CCTCTCCTGC GCCTCGGGGG GTGCTGCCTG GTGGGGAAAA (2) TAAGAGGTGC (2) TTCGCTGCCA (7) TTGATGCCAT 88.2 0.0882 Adult retinal AACTGAGGGG ACCTCCAGCC (2) ACTCCAGCCG ACTCCAGCTG (3) AGGGAGCTAC AGGTGAACCA (2) AGTAACCCAC (2) CCTCTCCTGC GAGAAATCCT GCCTCGGGGG GTAGGAGATG GTGGGGAAAA (2) TAAACTTTGG (2) TAAGAGGTGC (2) TCAAGCAAAA TGCCTCCTCA TTGATGCCAT TTGGTGGGAC (2) 95 0.095 ONL AACTGAGGGG ACCTCCAGCC (2) ACTCCAGCCG ACTCCAGCTG (3) AGTAACCCAC (2) CACGGCTTTC GCCTCGGGGG TCAAGCAAAA TTGATGCCAT TTGGTGGGAC (2) 47.7 0.0477