Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.277886	Ikbkb	inhibitor of kappaB kinase beta	8		16150
Gene Ontology	ATP binding | B-cell homeostasis | cytoplasm | I-kappaB phosphorylation | kinase activity | protein amino acid phosphorylation | protein binding | protein kinase activity | protein serine/threonine kinase activity | protein-tyrosine kinase activity | receptor signaling protein serine/threonine kinase activity | transferase activity
Human Homolog	IKBKB[inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 39 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GATCTTGTTT (4) 3.3 0.0033 P8 Cb GC CAGGCAAAGA (3) 1.6 0.0016 P8 Cb GC TGAATGTCTT (2) 1.6 0.0016 Cb medulloblastoma TGAATGTCTT (2) 4.6 0.0046 Cb medulloblastoma TGTAAAAATA (4) 2.3 0.0023 P8 GC+1d culture TGTGTGTGTA (16) 4.6 0.0046 P8 GC+1d culture ATGTTGAGTT (4) 2.3 0.0023 P8 GC+1d culture GATCTTGTTT (4) 2.3 0.0023 P8 GC+1d culture CACACAAACA (4) 1.1 0.0011 P8 GC+SHH+1d culture GATCTTGTTT (4) 3.5 0.0035 P8 GC+SHH+1d culture ATGTTGAGTT (4) 1.2 0.0012 3T3 fibroblasts GTCACAGGCA (6) 3.5 0.0035 E15 cortex TGTGTGTGTA (16) 4.9 0.0049 Hypothalamus CACACAAACA (4) 1.8 0.0018 Hypothalamus TGAATGTCTT (2) 1.8 0.0018 Hypothalamus TGTGTGTGTA (16) 1.8 0.0018 E14.5 retina CAGGCAAAGA (3) 3.6 0.0036 E14.5 retina GATCTTGTTT (4) 1.8 0.0018 E16.5 retina TGTGTGTGTA (16) 1.8 0.0018 E18.5 retina GATCTTGTTT (4) 3.6 0.0036 E18.5 retina TGTAAAAATA (4) 1.8 0.0018 P0.5 retina TGTGTGTGTA (16) 7.9 0.0079 P0.5 retina GATCTTGTTT (4) 3.9 0.0039 P0.5 retina CAGGCAAAGA (3) 2 0.002 P2.5 retina GATCTTGTTT (4) 7 0.007 P2.5 retina ATGTTGAGTT (4) 1.8 0.0018 P2.5 retina CACACAAACA (4) 1.8 0.0018 P4.5 retina CAGGCAAAGA (3) 2 0.002 P4.5 retina TGTGTGTGTA (16) 2 0.002 P6.5 retina TGTGTGTGTA (16) 5 0.005 P6.5 retina CAGGCAAAGA (3) 1.7 0.0017 P10.5 crx- retina TGTGTGTGTA (16) 5.6 0.0056 P10.5 crx- retina GTCACAGGCA (6) 3.7 0.0037 P10.5 crx+ retina ATGTTGAGTT (4) 1.9 0.0019 P10.5 crx+ retina GATCTTGTTT (4) 1.9 0.0019 P10.5 crx+ retina TGTAAAAATA (4) 1.9 0.0019 Adult retinal TGTGTGTGTA (16) 7.4 0.0074 ONL TGTGTGTGTA (16) 3.8 0.0038 ONL CAGGCAAAGA (3) 1.9 0.0019