Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.277886	Ikbkb	inhibitor of kappaB kinase beta	8		16150
Gene Ontology	ATP binding | B-cell homeostasis | cytoplasm | I-kappaB phosphorylation | kinase activity | protein amino acid phosphorylation | protein binding | protein kinase activity | protein serine/threonine kinase activity | protein-tyrosine kinase activity | receptor signaling protein serine/threonine kinase activity | transferase activity
Human Homolog	IKBKB[inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 39 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAGGCAAAGA GATCTTGTTT (3) TGAATGTCTT 6.5 0.0065 Cb medulloblastoma TGAATGTCTT TGTAAAAATA (2) 6.9 0.0069 P8 GC+1d culture ATGTTGAGTT (4) CACACAAACA GATCTTGTTT (3) TGTGTGTGTA (2) 10.3 0.0103 P8 GC+SHH+1d culture ATGTTGAGTT (4) GATCTTGTTT (3) 4.7 0.0047 3T3 fibroblasts GTCACAGGCA (2) 3.5 0.0035 E15 cortex TGTGTGTGTA (2) 4.9 0.0049 Hypothalamus CACACAAACA TGAATGTCTT TGTGTGTGTA (2) 5.4 0.0054 E14.5 retina CAGGCAAAGA GATCTTGTTT (3) 5.4 0.0054 E16.5 retina TGTGTGTGTA (2) 1.8 0.0018 E18.5 retina GATCTTGTTT (3) TGTAAAAATA (2) 5.4 0.0054 P0.5 retina CAGGCAAAGA GATCTTGTTT (3) TGTGTGTGTA (2) 13.8 0.0138 P2.5 retina ATGTTGAGTT (4) CACACAAACA GATCTTGTTT (3) 10.6 0.0106 P4.5 retina CAGGCAAAGA TGTGTGTGTA (2) 4 0.004 P6.5 retina CAGGCAAAGA TGTGTGTGTA (2) 6.7 0.0067 P10.5 crx- retina GTCACAGGCA (2) TGTGTGTGTA (2) 9.3 0.0093 P10.5 crx+ retina ATGTTGAGTT (4) GATCTTGTTT (3) TGTAAAAATA (2) 5.7 0.0057 Adult retinal TGTGTGTGTA (2) 7.4 0.0074 ONL CAGGCAAAGA TGTGTGTGTA (2) 5.7 0.0057