| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | TTCAGATTAT (2) TTCTGATAAT (2)
| 11.4 | 0.0114 |
| Cb medulloblastoma | TTCAGATTAT (2)
| 6.9 | 0.0069 |
| P8 GC+1d culture | TCTGCTTCTG (2) TTCAGATTAT (2)
| 6.8 | 0.0068 |
| P8 GC+SHH+1d culture | TCTGCTTCTG (2) TTCAGATTAT (2)
| 7.1 | 0.0071 |
| 3T3 fibroblasts | TCTGCTTCTG (2)
| 3.5 | 0.0035 |
| E15 cortex | CGTCCCCCAC (2) TTCTGATAAT (2)
| 9.8 | 0.0098 |
| P1 cortex | TCTGCTTCTG (2) TTCAGATTAT (2)
| 13.6 | 0.0136 |
| Hypothalamus | CGGACTCGGC (2) TCTGCTTCTG (2) TTCAGATTAT (2)
| 5.4 | 0.0054 |
| E12.5 retina | TTCAGATTAT (2)
| 3.8 | 0.0038 |
| E14.5 retina | TTCAGATTAT (2) TTCTGATAAT (2)
| 7.3 | 0.0073 |
| E16.5 retina | CGTCCCCCAC (2) TCTGCTTCTG (2) TTCAGATTAT (2)
| 5.4 | 0.0054 |
| E18.5 retina | CGTCCCCCAC (2) TCTGCTTCTG (2) TTCAGATTAT (2)
| 9.1 | 0.0091 |
| P0.5 retina | TTCAGATTAT (2)
| 2 | 0.002 |
| P2.5 retina | TCTGCTTCTG (2) TTCAGATTAT (2)
| 10.6 | 0.0106 |
| P4.5 retina | CGGACTCGGC (2) TCTGCTTCTG (2) TTCAGATTAT (2) TTCTGATAAT (2)
| 25.8 | 0.0258 |
| P6.5 retina | TCTGCTTCTG (2) TTCAGATTAT (2)
| 13.3 | 0.0133 |
| P10.5 crx- retina | TCTGCTTCTG (2) TTCAGATTAT (2)
| 7.5 | 0.0075 |
| P10.5 crx+ retina | TTCAGATTAT (2)
| 5.8 | 0.0058 |
| Adult retinal | CGGACTCGGC (2) TTCTGATAAT (2)
| 3.8 | 0.0038 |
| ONL | TCTGCTTCTG (2)
| 1.9 | 0.0019 |