Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.278560	Atp5d	ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit	10		66043
Gene Ontology	hydrogen ion transporter activity | mitochondrial membrane | proton transport | proton-transporting ATP synthase complex
Human Homolog	ATP5D[ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 42 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAGGATTCCC 21.2 0.0212 P8 Cb GC CTGGACCTGG (2) 1.6 0.0016 Cb medulloblastoma GAGGATTCCC 27.7 0.0277 Cb medulloblastoma TTGCCCGCCT 2.3 0.0023 P8 GC+1d culture GAGGATTCCC 35.4 0.0354 P8 GC+1d culture ACCTGGCAAA 2.3 0.0023 P8 GC+1d culture ACCTGGCAGA (3) 1.1 0.0011 P8 GC+SHH+1d culture GAGGATTCCC 32.8 0.0328 P8 GC+SHH+1d culture CTGGACCTGG (2) 3.5 0.0035 P8 GC+SHH+1d culture ACCTGGCAGA (3) 2.3 0.0023 3T3 fibroblasts GAGGATTCCC 21 0.021 E15 cortex GAGGATTCCC 34.6 0.0346 P1 cortex GAGGATTCCC 27.3 0.0273 Hypothalamus GAGGATTCCC 41.7 0.0417 Hypothalamus ACCTGGCAGA (3) 7.2 0.0072 Hypothalamus TTGCCCGCCT 5.4 0.0054 Hypothalamus CTGGACCTGG (2) 3.6 0.0036 E12.5 retina GAGGATTCCC 26.3 0.0263 E12.5 retina ACCTGGCAGA (3) 5.6 0.0056 E12.5 retina CTGGACCTGG (2) 1.9 0.0019 E12.5 retina GAAACCAAGA (2) 1.9 0.0019 E12.5 retina TTGCCCGCCT 1.9 0.0019 E14.5 retina GAGGATTCCC 31 0.031 E14.5 retina ACCTGGCAGA (3) 1.8 0.0018 E16.5 retina GAGGATTCCC 45.3 0.0453 E16.5 retina ACCTGGCAGA (3) 5.4 0.0054 E16.5 retina TTGCCCGCCT 1.8 0.0018 E18.5 retina GAGGATTCCC 43.7 0.0437 E18.5 retina ACCTGGCAGA (3) 1.8 0.0018 P0.5 retina GAGGATTCCC 23.6 0.0236 P2.5 retina GAGGATTCCC 37 0.037 P4.5 retina GAGGATTCCC 35.7 0.0357 P6.5 retina GAGGATTCCC 23.3 0.0233 P10.5 crx- retina GAGGATTCCC 27.9 0.0279 P10.5 crx- retina CTGGACCTGG (2) 1.9 0.0019 P10.5 crx- retina GAAACCAAGA (2) 1.9 0.0019 P10.5 crx+ retina GAGGATTCCC 26.9 0.0269 P10.5 crx+ retina ACCTGGCAGA (3) 3.8 0.0038 Adult retinal GAGGATTCCC 25.9 0.0259 ONL GAGGATTCCC 3.8 0.0038 ONL CTGGACCTGG (2) 1.9 0.0019 ONL GAAACCAAGA (2) 1.9 0.0019