Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.278974	9030416H16Rik	RIKEN cDNA 9030416H16 gene	5		71521
Human Homolog	SCC-112[SCC-112 protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 87 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTGGCGCACG (61) 13.1 0.0131 P8 Cb GC GGCTGGATTT (3) 9.8 0.0098 P8 Cb GC AAAGATGGCA (5) 8.2 0.0082 P8 Cb GC AAGGAACAGA (3) 1.6 0.0016 P8 Cb GC ATTTTTTTTT (36) 1.6 0.0016 P8 Cb GC TCTTAAAAAA (9) 1.6 0.0016 P8 Cb GC TTTTGTATTT 1.6 0.0016 Cb medulloblastoma AAAGATGGCA (5) 16.2 0.0162 Cb medulloblastoma GTGGCGCACG (61) 6.9 0.0069 Cb medulloblastoma TGCAGCACAA 2.3 0.0023 P8 GC+1d culture AAAGATGGCA (5) 8 0.008 P8 GC+1d culture GTGGCGCACG (61) 6.8 0.0068 P8 GC+1d culture CTGCAGATTT 2.3 0.0023 P8 GC+1d culture ATTTTTTTTT (36) 1.1 0.0011 P8 GC+1d culture GGCTGGATTT (3) 1.1 0.0011 P8 GC+1d culture TTTTGTATTT 1.1 0.0011 P8 GC+SHH+1d culture AAAGATGGCA (5) 10.5 0.0105 P8 GC+SHH+1d culture GGCTGGATTT (3) 5.9 0.0059 P8 GC+SHH+1d culture ATTTTTTTTT (36) 3.5 0.0035 P8 GC+SHH+1d culture CTGCAGATTT 2.3 0.0023 P8 GC+SHH+1d culture GTGGCGCACG (61) 2.3 0.0023 3T3 fibroblasts GTGGCGCACG (61) 63.1 0.0631 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts CTGCAGATTT 3.5 0.0035 E15 cortex GTGGCGCACG (61) 113.8 0.1138 E15 cortex GGCTGGATTT (3) 9.9 0.0099 E15 cortex GTCATAGCTG (590) 4.9 0.0049 E15 cortex TGCAGCACAA 4.9 0.0049 P1 cortex GTGGCGCACG (61) 18.2 0.0182 P1 cortex AAAGATGGCA (5) 4.5 0.0045 P1 cortex ATTTTTTTTT (36) 4.5 0.0045 P1 cortex TGCAGCACAA 4.5 0.0045 Hypothalamus GTGGCGCACG (61) 3.6 0.0036 Hypothalamus TGCAGCACAA 3.6 0.0036 Hypothalamus AAAGATGGCA (5) 1.8 0.0018 E12.5 retina GTGGCGCACG (61) 11.3 0.0113 E12.5 retina CTGCAGATTT 1.9 0.0019 E14.5 retina GTGGCGCACG (61) 29.2 0.0292 E14.5 retina GGCTGGATTT (3) 7.3 0.0073 E14.5 retina ATTTTTTTTT (36) 1.8 0.0018 E16.5 retina GTGGCGCACG (61) 25.4 0.0254 E16.5 retina GGCTGGATTT (3) 5.4 0.0054 E16.5 retina AAAGATGGCA (5) 1.8 0.0018 E18.5 retina GTGGCGCACG (61) 10.9 0.0109 E18.5 retina ATTTTTTTTT (36) 1.8 0.0018 E18.5 retina GGCTGGATTT (3) 1.8 0.0018 E18.5 retina TCTTAAAAAA (9) 1.8 0.0018 P0.5 retina GTGGCGCACG (61) 25.5 0.0255 P0.5 retina AAAGATGGCA (5) 3.9 0.0039 P0.5 retina ATTTTTTTTT (36) 3.9 0.0039 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P2.5 retina GTGGCGCACG (61) 17.6 0.0176 P2.5 retina AAAGATGGCA (5) 5.3 0.0053 P2.5 retina ATTTTTTTTT (36) 3.5 0.0035 P2.5 retina TCTTAAAAAA (9) 3.5 0.0035 P2.5 retina GGCTGGATTT (3) 1.8 0.0018 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P4.5 retina GTGGCGCACG (61) 17.8 0.0178 P4.5 retina AAAGATGGCA (5) 7.9 0.0079 P4.5 retina ATTTTTTTTT (36) 4 0.004 P4.5 retina AAGGAACAGA (3) 2 0.002 P4.5 retina GGCTGGATTT (3) 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P4.5 retina TCTTAAAAAA (9) 2 0.002 P6.5 retina GTGGCGCACG (61) 38.3 0.0383 P6.5 retina AAAGATGGCA (5) 6.7 0.0067 P6.5 retina GGCTGGATTT (3) 5 0.005 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina CTGCAGATTT 1.7 0.0017 P6.5 retina TCTTAAAAAA (9) 1.7 0.0017 P10.5 crx- retina GTGGCGCACG (61) 13 0.013 P10.5 crx- retina GGCTGGATTT (3) 11.1 0.0111 P10.5 crx- retina AAAGATGGCA (5) 3.7 0.0037 P10.5 crx- retina AAGGAACAGA (3) 1.9 0.0019 P10.5 crx+ retina GTGGCGCACG (61) 32.7 0.0327 P10.5 crx+ retina AAAGATGGCA (5) 3.8 0.0038 P10.5 crx+ retina GGCTGGATTT (3) 1.9 0.0019 Adult retinal GTGGCGCACG (61) 22.2 0.0222 Adult retinal AAAGATGGCA (5) 1.9 0.0019 Adult retinal GGCTGGATTT (3) 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 Adult retinal TCTTAAAAAA (9) 1.9 0.0019 ONL GTGGCGCACG (61) 23 0.023 ONL GTCATAGCTG (590) 5.7 0.0057 ONL GGCTGGATTT (3) 1.9 0.0019 ONL TCTTAAAAAA (9) 1.9 0.0019 ONL TTTTGTATTT 1.9 0.0019