Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.278974	9030416H16Rik	RIKEN cDNA 9030416H16 gene	5		71521
Human Homolog	SCC-112[SCC-112 protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 87 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAGATGGCA AAGGAACAGA (2) ATTTTTTTTT (4) GGCTGGATTT GTGGCGCACG TCTTAAAAAA (3) TTTTGTATTT 37.5 0.0375 Cb medulloblastoma AAAGATGGCA GTGGCGCACG TGCAGCACAA 25.4 0.0254 P8 GC+1d culture AAAGATGGCA ATTTTTTTTT (4) CTGCAGATTT GGCTGGATTT GTGGCGCACG TTTTGTATTT 20.4 0.0204 P8 GC+SHH+1d culture AAAGATGGCA ATTTTTTTTT (4) CTGCAGATTT GGCTGGATTT GTGGCGCACG 24.5 0.0245 3T3 fibroblasts CTGCAGATTT GTCATAGCTG (2) GTGGCGCACG 77.1 0.0771 E15 cortex GGCTGGATTT GTCATAGCTG (2) GTGGCGCACG TGCAGCACAA 133.5 0.1335 P1 cortex AAAGATGGCA ATTTTTTTTT (4) GTGGCGCACG TGCAGCACAA 31.7 0.0317 Hypothalamus AAAGATGGCA GTGGCGCACG TGCAGCACAA 9 0.009 E12.5 retina CTGCAGATTT GTGGCGCACG 13.2 0.0132 E14.5 retina ATTTTTTTTT (4) GGCTGGATTT GTGGCGCACG 38.3 0.0383 E16.5 retina AAAGATGGCA GGCTGGATTT GTGGCGCACG 32.6 0.0326 E18.5 retina ATTTTTTTTT (4) GGCTGGATTT GTGGCGCACG TCTTAAAAAA (3) 16.3 0.0163 P0.5 retina AAAGATGGCA ATTTTTTTTT (4) GTCATAGCTG (2) GTGGCGCACG 37.2 0.0372 P2.5 retina AAAGATGGCA ATTTTTTTTT (4) GGCTGGATTT GTCATAGCTG (2) GTGGCGCACG TCTTAAAAAA (3) 33.5 0.0335 P4.5 retina AAAGATGGCA AAGGAACAGA (2) ATTTTTTTTT (4) GGCTGGATTT GTCATAGCTG (2) GTGGCGCACG TCTTAAAAAA (3) 37.7 0.0377 P6.5 retina AAAGATGGCA CTGCAGATTT GGCTGGATTT GTCATAGCTG (2) GTGGCGCACG TCTTAAAAAA (3) 56.7 0.0567 P10.5 crx- retina AAAGATGGCA AAGGAACAGA (2) GGCTGGATTT GTGGCGCACG 29.7 0.0297 P10.5 crx+ retina AAAGATGGCA GGCTGGATTT GTGGCGCACG 38.4 0.0384 Adult retinal AAAGATGGCA GGCTGGATTT GTCATAGCTG (2) GTGGCGCACG TCTTAAAAAA (3) 29.8 0.0298 ONL GGCTGGATTT GTCATAGCTG (2) GTGGCGCACG TCTTAAAAAA (3) TTTTGTATTT 34.4 0.0344