Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.27913	2610016F04Rik	RIKEN cDNA 2610016F04 gene	14		66923
Gene Ontology	DNA binding | regulation of transcription, DNA-dependent
Human Homolog	PB1[polybromo 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 158 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAATAAATAA (2) CAGGCAAAAC (2) GCAGATGCCC GCCGGGATTC GCTCCTCCCC TATGTATCAT TCTCAAAAAA (3) 35.9 0.0359 Cb medulloblastoma AAAAAAATTA (2) AAATAAATAA (2) AAGGCAAAAA (2) CAGGCAAAAC (2) GCCGGGATTC GCTCCTCCCC TCTCAAAAAA (3) 34.5 0.0345 P8 GC+1d culture AAAAAAATTA (2) AAATAAATAA (2) ATTCTAACAC CAGGCAAAAC (2) CATTAATTTT (2) CTGTTCTTAA GCAGATGCCC GCTCCTCCCC GCTTCTCCCA (4) TATGTATCAT TCTCAAAAAA (3) 34 0.034 P8 GC+SHH+1d culture AAATAAATAA (2) AGAACAAAAG (2) AGAACAAAGA CAGGCAAAAC (2) CATTAATTTT (2) GCTCCTCCCC GCTTCTCCCA (4) TATGTATCAT TCTCAAAAAA (3) TTTTAAAATG 45.7 0.0457 3T3 fibroblasts AGTCATCAGG CAGGCAAAAC (2) GCCGGGATTC GCTCCTCCCC GTCATAGCTG (2) 35 0.035 E15 cortex AAGGCAAAAA (2) AGTCATCAGG CAGGCAAAAC (2) CATTAATTTT (2) GCTCCTCCCC GTCATAGCTG (2) 39.4 0.0394 P1 cortex AAAAAAATTA (2) AAGGCAAAAA (2) AGTCATCAGG CAGGCAAAAC (2) GCCGGGATTC GCTCCTCCCC TATGTATCAT TCTCAAGAAA 45.2 0.0452 Hypothalamus AAATAAATAA (2) AAGGCAAAAA (2) AGAACAAAGA ATTCTAACAC CAGGCAAAAC (2) CTGTTCTTAA GCTCCTCCCC TATGTATCAT TCTCAAAAAA (3) 34.3 0.0343 E12.5 retina AAATAAATAA (2) ATTCTAACAC CAGGCAAAAC (2) CTGTTCTTAA GCCGGGATTC GCTCCTCCCC TATGTATCAT TCTCAAGAAA 62.1 0.0621 E14.5 retina AAAAAAATTA (2) AAATAAATAA (2) AAGGCAAAAA (2) AGAACAAAAG (2) AGAACAAAGA CAGGCAAAAC (2) GCCGGGATTC GCTCCTCCCC GCTTCTCCCA (4) TATGTATCAT TCTCAAAAAA (3) 49 0.049 E16.5 retina AAATAAATAA (2) ATTACGCCAA CAGGCAAAAC (2) GCTCCTCCCC GCTTCTCCCA (4) TATGTATCAT TCTCAAAAAA (3) 34.4 0.0344 E18.5 retina AAATAAATAA (2) AAGGCAAAAA (2) ATTCTAACAC CAGGCAAAAC (2) GCCGGGATTC GCTCCTCCCC TATGTATCAT TCTCAAAAAA (3) 49 0.049 P0.5 retina AAATAAATAA (2) AAGGCAAAAA (2) ATTACGCCAA CAGGCAAAAC (2) GCAGATGCCC GCTCCTCCCC GTCATAGCTG (2) TTTTAAAATG 35.5 0.0355 P2.5 retina AAAAAAATTA (2) AAATAAATAA (2) AAGGCAAAAA (2) CAGGCAAAAC (2) GCCGGGATTC GCTCCTCCCC GTCATAGCTG (2) TCTCAAAAAA (3) 52.8 0.0528 P4.5 retina AAATAAATAA (2) ATTCTAACAC CAGGCAAAAC (2) CATTAATTTT (2) GCAGATGCCC GCTCCTCCCC GTCATAGCTG (2) TATGTATCAT TCTCAAAAAA (3) 43.7 0.0437 P6.5 retina AAATAAATAA (2) AGAACAAAAG (2) CAGGCAAAAC (2) GCTCCTCCCC GTCATAGCTG (2) TCTCAAAAAA (3) TCTCAAGAAA TTTTAAAATG 38.4 0.0384 P10.5 crx- retina AAATAAATAA (2) AGAACAAAAG (2) CAGGCAAAAC (2) CTGTTCTTAA GCTCCTCCCC TATGTATCAT TCTCAAGAAA 35.3 0.0353 P10.5 crx+ retina AAATAAATAA (2) CAGGCAAAAC (2) CTGTTCTTAA GCCGGGATTC GCTCCTCCCC TATGTATCAT TCTCAAAAAA (3) 40.2 0.0402 Adult retinal AGTCATCAGG ATTACGCCAA CAGGCAAAAC (2) GCTCCTCCCC GTCATAGCTG (2) TCTCAAAAAA (3) 31.6 0.0316 ONL AAATAAATAA (2) CAGGCAAAAC (2) GCTCCTCCCC GTCATAGCTG (2) TATGTATCAT TCTCAAAAAA (3) TCTCAAGAAA TTTTAAAATG 82.3 0.0823