Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.279923	A530064N14Rik	RIKEN cDNA A530064N14 gene	9		402761
Mm.279923	Nedd4	neural precursor cell expressed, developmentally down-regulted gene 4	9	9 D (9 40.0 cM)	17999
Gene Ontology	cytosol | intracellular | ligase activity | protein binding | protein modification | ubiquitin cycle | ubiquitin ligase complex | ubiquitin-protein ligase activity | ubiquitin-protein ligase activity
Human Homolog	NEDD4[neural precursor cell expressed, developmentally down-regulated 4]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 22 In Situ Hybridization Images

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SAGE Tags

Total 107 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCCACCGTCC (2) 31 0.031 P8 Cb GC TGGATGCTGG (3) 13.1 0.0131 P8 Cb GC TCGCTACTTA (2) 8.2 0.0082 P8 Cb GC AAAACATCTC (3) 6.5 0.0065 P8 Cb GC GAGTCCGTGG (4) 4.9 0.0049 P8 Cb GC TATGACTTGC (2) 4.9 0.0049 P8 Cb GC AACCACCAGG (3) 1.6 0.0016 P8 Cb GC GCAAGCTGTT (3) 1.6 0.0016 P8 Cb GC TGTGGTCTGG (2) 1.6 0.0016 Cb medulloblastoma GCCACCGTCC (2) 120.2 0.1202 Cb medulloblastoma GCAGGGGTTG (2) 4.6 0.0046 Cb medulloblastoma TGGATGCTGG (3) 4.6 0.0046 Cb medulloblastoma GAGTCCGTGG (4) 2.3 0.0023 Cb medulloblastoma GCAAGCTGTT (3) 2.3 0.0023 Cb medulloblastoma GCAGCTGTTG (5) 2.3 0.0023 Cb medulloblastoma GGGGGCTGTG (4) 2.3 0.0023 Cb medulloblastoma TAATAAAAAA (3) 2.3 0.0023 Cb medulloblastoma TATGACTTGC (2) 2.3 0.0023 Cb medulloblastoma TCGCTACTTA (2) 2.3 0.0023 Cb medulloblastoma TGTGGTCTGG (2) 2.3 0.0023 P8 GC+1d culture AAAACATCTC (3) 18.3 0.0183 P8 GC+1d culture TGGATGCTGG (3) 8 0.008 P8 GC+1d culture TAATAAAAAA (3) 3.4 0.0034 P8 GC+1d culture GCAGGGGTTG (2) 1.1 0.0011 P8 GC+1d culture TAAGGATTTC (2) 1.1 0.0011 P8 GC+1d culture TATGACTTGC (2) 1.1 0.0011 P8 GC+SHH+1d culture AAAACATCTC (3) 14.1 0.0141 P8 GC+SHH+1d culture TATGACTTGC (2) 5.9 0.0059 P8 GC+SHH+1d culture GCCACCGTCC (2) 3.5 0.0035 P8 GC+SHH+1d culture TGGATGCTGG (3) 2.3 0.0023 P8 GC+SHH+1d culture TAAGGATTTC (2) 1.2 0.0012 P8 GC+SHH+1d culture TCGCTACTTA (2) 1.2 0.0012 3T3 fibroblasts GCCACCGTCC (2) 17.5 0.0175 3T3 fibroblasts AACCACCAGG (3) 10.5 0.0105 3T3 fibroblasts GGGGGCTGTG (4) 7 0.007 3T3 fibroblasts TGGATGCTGG (3) 3.5 0.0035 E15 cortex TGGATGCTGG (3) 14.8 0.0148 E15 cortex AACCACCAGG (3) 9.9 0.0099 E15 cortex TCGCTACTTA (2) 4.9 0.0049 P1 cortex AAAACATCTC (3) 4.5 0.0045 Hypothalamus AAAACATCTC (3) 7.2 0.0072 Hypothalamus TGGATGCTGG (3) 5.4 0.0054 Hypothalamus GCAGGGGTTG (2) 3.6 0.0036 Hypothalamus GGGGGCTGTG (4) 1.8 0.0018 E12.5 retina AAAACATCTC (3) 54.4 0.0544 E12.5 retina TGGATGCTGG (3) 5.6 0.0056 E12.5 retina GCCACCGTCC (2) 3.8 0.0038 E12.5 retina TCGCTACTTA (2) 3.8 0.0038 E12.5 retina GAAGGGTTCA (2) 1.9 0.0019 E12.5 retina GGGGGCTGTG (4) 1.9 0.0019 E12.5 retina TATGACTTGC (2) 1.9 0.0019 E14.5 retina TGGATGCTGG (3) 18.2 0.0182 E14.5 retina AAAACATCTC (3) 10.9 0.0109 E14.5 retina GCCACCGTCC (2) 1.8 0.0018 E14.5 retina TATGACTTGC (2) 1.8 0.0018 E14.5 retina TCGCTACTTA (2) 1.8 0.0018 E16.5 retina TGGATGCTGG (3) 30.8 0.0308 E16.5 retina AAAACATCTC (3) 7.2 0.0072 E16.5 retina TATGACTTGC (2) 7.2 0.0072 E16.5 retina TGGTACTAAG (2) 5.4 0.0054 E16.5 retina GGGGGCTGTG (4) 3.6 0.0036 E16.5 retina TAAGGATTTC (2) 3.6 0.0036 E18.5 retina AAAACATCTC (3) 7.3 0.0073 E18.5 retina GCAGCTGTTG (5) 1.8 0.0018 E18.5 retina GCAGGGGTTG (2) 1.8 0.0018 E18.5 retina GGGGGCTGTG (4) 1.8 0.0018 E18.5 retina TAATAAAAAA (3) 1.8 0.0018 E18.5 retina TATGACTTGC (2) 1.8 0.0018 E18.5 retina TGGATGCTGG (3) 1.8 0.0018 P0.5 retina TGGATGCTGG (3) 7.9 0.0079 P0.5 retina AAAACATCTC (3) 5.9 0.0059 P0.5 retina GAGTCCGTGG (4) 3.9 0.0039 P0.5 retina GAAGGGTTCA (2) 2 0.002 P0.5 retina GCCACCGTCC (2) 2 0.002 P0.5 retina TATGACTTGC (2) 2 0.002 P2.5 retina TGGATGCTGG (3) 15.8 0.0158 P2.5 retina AAAACATCTC (3) 10.6 0.0106 P2.5 retina TATGACTTGC (2) 7 0.007 P2.5 retina TAATAAAAAA (3) 5.3 0.0053 P2.5 retina GAAGGGTTCA (2) 1.8 0.0018 P4.5 retina TGGATGCTGG (3) 5.9 0.0059 P4.5 retina GAAGGGTTCA (2) 2 0.002 P4.5 retina TAATAAAAAA (3) 2 0.002 P4.5 retina TATGACTTGC (2) 2 0.002 P6.5 retina AAAACATCTC (3) 11.7 0.0117 P6.5 retina TGGATGCTGG (3) 6.7 0.0067 P6.5 retina GCAAGCTGTT (3) 1.7 0.0017 P6.5 retina TAATAAAAAA (3) 1.7 0.0017 P6.5 retina TATGACTTGC (2) 1.7 0.0017 P10.5 crx- retina AAAACATCTC (3) 48.3 0.0483 P10.5 crx- retina GCCACCGTCC (2) 13 0.013 P10.5 crx- retina GGGGGCTGTG (4) 7.4 0.0074 P10.5 crx- retina TAAGGATTTC (2) 7.4 0.0074 P10.5 crx- retina TGGATGCTGG (3) 5.6 0.0056 P10.5 crx- retina GCAGGGGTTG (2) 1.9 0.0019 P10.5 crx- retina TAATAAAAAA (3) 1.9 0.0019 P10.5 crx- retina TATGACTTGC (2) 1.9 0.0019 P10.5 crx+ retina GCCACCGTCC (2) 86.5 0.0865 P10.5 crx+ retina TGGATGCTGG (3) 5.8 0.0058 P10.5 crx+ retina AAAACATCTC (3) 3.8 0.0038 P10.5 crx+ retina GGGGGCTGTG (4) 1.9 0.0019 Adult retinal AAAACATCTC (3) 5.6 0.0056 Adult retinal TGGATGCTGG (3) 5.6 0.0056 ONL GCAGGGGTTG (2) 5.7 0.0057 ONL GCAGCTGTTG (5) 1.9 0.0019 ONL TCGCTACTTA (2) 1.9 0.0019 ONL TGTGGTCTGG (2) 1.9 0.0019