Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.280068	Chc1l	chromosome condensation 1-like	14		105670
Gene Ontology	protein binding
Human Homolog	CHC1L[chromosome condensation 1-like]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 82 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCTGTTGTGC TATAATTATT TCAGGAAACA (2) TTTTTCCCAA (3) 22.8 0.0228 Cb medulloblastoma CAGACCTCAA (2) CGGGCATCGG TCAGGAAACA (2) TGGGGCCAGT 13.8 0.0138 P8 GC+1d culture CAGACCTCAA (2) CGGGCATCGG GCTGTTGTGC TCAGGAAACA (2) TTTTTCCCAA (3) 17.1 0.0171 P8 GC+SHH+1d culture CAGACCTCAA (2) CGGGCATCGG GCTGTTGTGC TCAGGAAACA (2) TGGGGCCAGT 25.7 0.0257 3T3 fibroblasts CAGACCTCAA (2) CGGGCATCGG 7 0.007 E15 cortex GCTGTTGTGC 4.9 0.0049 P1 cortex CAGACCTCAA (2) CGGGCATCGG TCAGGAAACA (2) TTTTTCCCAA (3) 36.3 0.0363 Hypothalamus CAGACCTCAA (2) CGGGCATCGG TATAATTATT TCAGGAAACA (2) TGGGGCCAGT 21.7 0.0217 E12.5 retina AGAGGAGGAA CGGGCATCGG GCTGTTGTGC TATAATTATT TCAGGAAACA (2) 32 0.032 E14.5 retina CAGACCTCAA (2) CGGGCATCGG GCTGTTGTGC TATAATTATT TCAGGAAACA (2) 40.1 0.0401 E16.5 retina CGGGCATCGG GCTGTTGTGC TATAATTATT TCAGGAAACA (2) TTTTTCCCAA (3) 25.3 0.0253 E18.5 retina CAGACCTCAA (2) GCTGTTGTGC TATAATTATT TCAGGAAACA (2) TTTTTCCCAA (3) 23.6 0.0236 P0.5 retina AGAGGAGGAA GCTGTTGTGC TCAGGAAACA (2) TGGGGCCAGT 9.9 0.0099 P2.5 retina CAGACCTCAA (2) CGGGCATCGG GCTGTTGTGC TATAATTATT TCAGGAAACA (2) 33.5 0.0335 P4.5 retina CAGACCTCAA (2) CGGGCATCGG GCTGTTGTGC TCAGGAAACA (2) 27.7 0.0277 P6.5 retina AGAGGAGGAA CAGACCTCAA (2) CGGGCATCGG GCTGTTGTGC TCAGGAAACA (2) 39.9 0.0399 P10.5 crx- retina CGGGCATCGG GCTGTTGTGC TCAGGAAACA (2) TTTTTCCCAA (3) 20.5 0.0205 P10.5 crx+ retina CAGACCTCAA (2) CGGGCATCGG GCTGTTGTGC TCAGGAAACA (2) TGGGGCCAGT 36.4 0.0364 Adult retinal CAGACCTCAA (2) CGGGCATCGG TCAGGAAACA (2) 11.2 0.0112 ONL CGGGCATCGG TCAGGAAACA (2) 21 0.021