Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.280103	Atp1a1	ATPase, Na+/K+ transporting, alpha 1 polypeptide	3	3 48.4 cM	11928
Gene Ontology	ATP binding | ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | catalytic activity | cation transport | cation-transporting ATPase activity | hydrolase activity | hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | integral to membrane | magnesium ion binding | membrane | metabolism | monovalent inorganic cation transport | monovalent inorganic cation transporter activity | plasma membrane | potassium ion transport | sodium ion transport | sodium/potassium-exchanging ATPase activity
Human Homolog	ATP1A1[ATPase, Na+/K+ transporting, alpha 1 polypeptide]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 42 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCCTATGGAC GTGGTTCTGT (2) TAGCTGTAAC 11.4 0.0114 Cb medulloblastoma GCCTATGGAC GTGGTTCTGT (2) TAGCTGTAAC 46.2 0.0462 P8 GC+1d culture ACTCTCCAGT AGGTGACTTG (2) CTTTGGTGCT GCCTATGGAC TAGCTGTAAC 37.6 0.0376 P8 GC+SHH+1d culture CTTTGGTGCT TAGCTGTAAC 26.9 0.0269 3T3 fibroblasts TAGCTGTAAC 7 0.007 E15 cortex ACTCTCCAGT GCGAGGAAGA (2) 9.8 0.0098 P1 cortex GCGAGGAAGA (2) 4.5 0.0045 Hypothalamus GCGAGGAAGA (2) GTGGTTCTGT (2) TAGCTGTAAC 18.1 0.0181 E12.5 retina ACTCTCCAGT AGGTGACTTG (2) TAGCTGTAAC 11.3 0.0113 E14.5 retina GTTACAGGAG (2) TAGCTGTAAC 3.6 0.0036 E16.5 retina AGGTGACTTG (2) GTTACAGGAG (2) 5.4 0.0054 E18.5 retina GCGACAAAAA 3.6 0.0036 P0.5 retina AGGTGACTTG (2) TAGCTGTAAC 11.8 0.0118 P2.5 retina GCGACAAAAA TAGCTGTAAC 3.6 0.0036 P4.5 retina TAGCTGTAAC 4 0.004 P6.5 retina TAGCTGTAAC 6.7 0.0067 P10.5 crx- retina AGGTGACTTG (2) TAGCTGTAAC 14.9 0.0149 P10.5 crx+ retina AGGTGACTTG (2) TAGCTGTAAC 9.6 0.0096 Adult retinal CTTTGGTGCT TAGCTGTAAC 9.3 0.0093 ONL AGGTGACTTG (2) TAGCTGTAAC 7.6 0.0076