Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.28017
5830420C07Rik
RIKEN cDNA 5830420C07 gene
11
77599
Mm.28017
Fbxw11
F-box and WD-40 domain protein 11
11
103583
Mm.28017
C530030P08Rik
RIKEN cDNA C530030P08 gene
11
97730
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 25 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
ACGGCTTTGT
(
3
)
9.8
0.0098
Cb medulloblastoma
ACGGCTTTGT
(
3
)
ATAATATCTG
(
3
)
34.7
0.0347
P8 GC+1d culture
ACGGCTTTGT
(
3
)
12.6
0.0126
P8 GC+SHH+1d culture
ACGGCTTTGT
(
3
)
14.1
0.0141
3T3 fibroblasts
ACGGCTTTGT
(
3
)
3.5
0.0035
Hypothalamus
ACGGCTTTGT
(
3
)
ATAATATCTG
(
3
)
14.5
0.0145
E12.5 retina
ACGGCTTTGT
(
3
)
7.5
0.0075
E14.5 retina
ACGGCTTTGT
(
3
)
ATAATATCTG
(
3
)
5.4
0.0054
E16.5 retina
ACGGCTTTGT
(
3
)
CAAAAGCAAC
(
3
)
19.9
0.0199
E18.5 retina
ACGGCTTTGT
(
3
)
9.1
0.0091
P0.5 retina
ACGGCTTTGT
(
3
)
7.9
0.0079
P2.5 retina
ACGGCTTTGT
(
3
)
CAAAAGCAAC
(
3
)
15.8
0.0158
P4.5 retina
ACGGCTTTGT
(
3
)
5.9
0.0059
P6.5 retina
ACGGCTTTGT
(
3
)
10
0.01
P10.5 crx- retina
ACGGCTTTGT
(
3
)
9.3
0.0093
P10.5 crx+ retina
ACGGCTTTGT
(
3
)
CAAAAGCAAC
(
3
)
21.1
0.0211
Adult retinal
ACGGCTTTGT
(
3
)
ATAATATCTG
(
3
)
11.2
0.0112
ONL
ACGGCTTTGT
(
3
)
7.7
0.0077
